CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000314
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 
Protein Synonyms/Alias
 Branched-chain alpha-ketoacid dehydrogenase kinase; BCKD-kinase; BCKDHKIN 
Gene Name
 BCKDK 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
48EMARERSKTVTSFYNubiquitination[1, 2]
184RKHIEDEKLVRYFLDacetylation[3]
192LVRYFLDKTLTSRLGacetylation[3]
233SPKKIIEKWVDFARRacetylation[3]
245ARRLCEHKYGNAPRVacetylation[3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861
Functional Description
 Catalyzes the phosphorylation and inactivation of the branched-chain alpha-ketoacid dehydrogenase complex, the key regulatory enzyme of the valine, leucine and isoleucine catabolic pathways. Key enzyme that regulate the activity state of the BCKD complex (By similarity). 
Sequence Annotation
 DOMAIN 159 404 Histidine kinase.
 MOD_RES 31 31 Phosphoserine (By similarity).
 MOD_RES 35 35 Phosphothreonine (By similarity).
 MOD_RES 52 52 Phosphoserine; by autocatalysis (By
 MOD_RES 192 192 N6-acetyllysine.
 MOD_RES 233 233 N6-acetyllysine.  
Keyword
 Acetylation; ATP-binding; Complete proteome; Disease mutation; Kinase; Mitochondrion; Nucleotide-binding; Phosphoprotein; Reference proteome; Serine/threonine-protein kinase; Transferase; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 412 AA 
Protein Sequence
MILASVLRSG PGGGLPLRPL LGPALALRAR STSATDTHHV EMARERSKTV TSFYNQSAID 60
AAAEKPSVRL TPTMMLYAGR SQDGSHLLKS ARYLQQELPV RIAHRIKGFR CLPFIIGCNP 120
TILHVHELYI RAFQKLTDFP PIKDQADEAQ YCQLVRQLLD DHKDVVTLLA EGLRESRKHI 180
EDEKLVRYFL DKTLTSRLGI RMLATHHLAL HEDKPDFVGI ICTRLSPKKI IEKWVDFARR 240
LCEHKYGNAP RVRINGHVAA RFPFIPMPLD YILPELLKNA MRATMESHLD TPYNVPDVVI 300
TIANNDVDLI IRISDRGGGI AHKDLDRVMD YHFTTAEAST QDPRISPLFG HLDMHSGAQS 360
GPMHGFGFGL PTSRAYAEYL GGSLQLQSLQ GIGTDVYLRL RHIDGREESF RI 412 
Gene Ontology
 GO:0005947; C:mitochondrial alpha-ketoglutarate dehydrogenase complex; ISS:HGNC.
 GO:0047323; F:[3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity; IEA:EC.
 GO:0005524; F:ATP binding; ISS:HGNC.
 GO:0004674; F:protein serine/threonine kinase activity; ISS:HGNC.
 GO:0009083; P:branched-chain amino acid catabolic process; ISS:HGNC. 
Interpro
 IPR018955; BCDHK/PDK_N.
 IPR003594; HATPase_ATP-bd.
 IPR004358; Sig_transdc_His_kin-like_C.
 IPR005467; Sig_transdc_His_kinase_core. 
Pfam
 PF10436; BCDHK_Adom3
 PF02518; HATPase_c 
SMART
 SM00387; HATPase_c 
PROSITE
 PS50109; HIS_KIN 
PRINTS
 PR00344; BCTRLSENSOR.