CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029220
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coronin 
Protein Synonyms/Alias
  
Gene Name
 CORO1C 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
25HVFGQAVKNDQCYDDubiquitination[1]
203CTASKDKKVRVIDPRubiquitination[2]
317YLNTFSSKEPQRGMGubiquitination[1, 2, 3]
328RGMGYMPKRGLDVNKubiquitination[2, 4, 5]
335KRGLDVNKCEIARFFubiquitination[2]
397DPILISLKHGYIPGKubiquitination[6]
452AKLDEILKEIKSIKDacetylation[7]
477KLEQQMAKIAA****ubiquitination[3, 8]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [6] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [7] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [8] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 480 AA 
Protein Sequence
MRWKDTMRRV VRQSKFRHVF GQAVKNDQCY DDIRVSRVTW DSSFCAVNPR FVAIIIEASG 60
GGAFLVLPLH KTGRIDKSYP TVCGHTGPVL DIDWCPHNDQ VIASGSEDCT VMVWQIPENG 120
LTLSLTEPVV ILEGHSKRVG IVAWHPTARN VLLSAGCDNA IIIWNVGTGE ALINLDDMHS 180
DMIYNVSWNR NGSLICTASK DKKVRVIDPR KQEIVAEKEK AHEGARPMRA IFLADGNVFT 240
TGFSRMSERQ LALWNPKNMQ EPIALHEMDT SNGVLLPFYD PDTSIIYLCG KGDSSIRYFE 300
ITDESPYVHY LNTFSSKEPQ RGMGYMPKRG LDVNKCEIAR FFKLHERKCE PIIMTVPRKS 360
DLFQDDLYPD TAGPEAALEA EEWFEGKNAD PILISLKHGY IPGKNRDLKV VKKNILDSKP 420
TANKKCDLIS IPKKTTDTAS VQNEAKLDEI LKEIKSIKDT ICNQDERISK LEQQMAKIAA 480 
Gene Ontology
 GO:0015629; C:actin cytoskeleton; IEA:InterPro.
 GO:0030036; P:actin cytoskeleton organization; IEA:InterPro. 
Interpro
 IPR027333; CORO1C.
 IPR015505; Coronin.
 IPR015048; DUF1899.
 IPR015049; DUF1900.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF08953; DUF1899
 PF08954; DUF1900
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS