CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025758
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosomal protein L4 
Protein Synonyms/Alias
  
Gene Name
 Rpl4 
Gene Synonyms/Alias
 mCG_12784 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
106GRMFAPTKTWRRWHRubiquitination[1]
157LPLVVEDKVEGYKKTubiquitination[1]
162EDKVEGYKKTKEAVQubiquitination[1]
173EAVQLLKKLKAWNDIubiquitination[1]
175VQLLKKLKAWNDIKKubiquitination[1]
234ITLLNVSKLNILKLAubiquitination[1]
259WTESAFRKLDELYGTubiquitination[1]
274WRKAASLKSNYNLPMubiquitination[1]
283NYNLPMHKMMNTDLSubiquitination[1]
294TDLSRILKSPEIQRAubiquitination[1]
320VLKKNPLKNLRIMLKubiquitination[1]
327KNLRIMLKLNPYAKTubiquitination[1]
333LKLNPYAKTMRRNTIubiquitination[1]
353NHKLRVKKLEAAATAubiquitination[1]
364AATALATKSEKVVPEubiquitination[1]
372SEKVVPEKGTADKKPubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 419 AA 
Protein Sequence
MACARPLISV YSEKGESSGK NVTLPAVFKA PIRPDIVNFV HTNLRKNNRQ PYAVSELAGH 60
QTSAESWGTG RAVARIPRVR GGGTHRSGQG AFGNMCRGGR MFAPTKTWRR WHRRVNTTQK 120
RYAICSALAA SALPALVMSK GHRIEEVPEL PLVVEDKVEG YKKTKEAVQL LKKLKAWNDI 180
KKVYASQRMR AGKGKMRNRR RIQRRGPCII YNEDNGIIKA FRNIPGITLL NVSKLNILKL 240
APGGHVGRFC IWTESAFRKL DELYGTWRKA ASLKSNYNLP MHKMMNTDLS RILKSPEIQR 300
ALRAPRKKIH RRVLKKNPLK NLRIMLKLNP YAKTMRRNTI LRQARNHKLR VKKLEAAATA 360
LATKSEKVVP EKGTADKKPA VGKKGKKVDA KKQKPAGKKV VAKKPAEKKP TTEEKKPAA 419 
Gene Ontology
 GO:0022625; C:cytosolic large ribosomal subunit; IEA:Compara.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0030529; C:ribonucleoprotein complex; ISO:MGI.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR025755; Ribos_L4_C_dom.
 IPR002136; Ribosomal_L4/L1e.
 IPR013000; Ribosomal_L4/L1e_euk/arc_CS.
 IPR023574; Ribosomal_L4_dom. 
Pfam
 PF14374; Ribos_L4_asso_C
 PF00573; Ribosomal_L4 
SMART
  
PROSITE
 PS00939; RIBOSOMAL_L1E 
PRINTS