CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009662
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vesicle-associated membrane protein 3 
Protein Synonyms/Alias
 VAMP-3; Cellubrevin; CEB; Synaptobrevin-3 
Gene Name
 Vamp3 
Gene Synonyms/Alias
 Syb3 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
39IMRVNVDKVLERDQKubiquitination[1]
46KVLERDQKLSELDDRacetylation[2]
46KVLERDQKLSELDDRubiquitination[1]
70QFETSAAKLKRKYWWubiquitination[1]
72ETSAAKLKRKYWWKNubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 SNARE involved in vesicular transport from the late endosomes to the trans-Golgi network (By similarity). 
Sequence Annotation
 DOMAIN 18 78 v-SNARE coiled-coil homology.
 MOD_RES 48 48 Phosphoserine (By similarity).  
Keyword
 Cell junction; Coiled coil; Complete proteome; Membrane; Phosphoprotein; Protein transport; Reference proteome; Synapse; Synaptosome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 103 AA 
Protein Sequence
MSTGVPSGSS AATGSNRRLQ QTQNQVDEVV DIMRVNVDKV LERDQKLSEL DDRADALQAG 60
ASQFETSAAK LKRKYWWKNC KMWAIGISVL VIIVIIIIVW CVS 103 
Gene Ontology
 GO:0016324; C:apical plasma membrane; IDA:RGD.
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0030665; C:clathrin-coated vesicle membrane; IDA:RGD.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0043005; C:neuron projection; IEA:UniProtKB-SubCell.
 GO:0055037; C:recycling endosome; IDA:RGD.
 GO:0030141; C:secretory granule; IEA:Compara.
 GO:0031201; C:SNARE complex; IDA:RGD.
 GO:0045202; C:synapse; IEA:UniProtKB-KW.
 GO:0017156; P:calcium ion-dependent exocytosis; IEA:Compara.
 GO:0043001; P:Golgi to plasma membrane protein transport; IEA:Compara.
 GO:0001921; P:positive regulation of receptor recycling; ISS:UniProtKB.
 GO:0006461; P:protein complex assembly; IDA:RGD.
 GO:0042147; P:retrograde transport, endosome to Golgi; ISS:UniProtKB.
 GO:0034446; P:substrate adhesion-dependent cell spreading; ISS:UniProtKB. 
Interpro
 IPR001388; Synaptobrevin.
 IPR016444; Synaptobrevin_met/fun. 
Pfam
 PF00957; Synaptobrevin 
SMART
  
PROSITE
 PS00417; SYNAPTOBREVIN
 PS50892; V_SNARE 
PRINTS
 PR00219; SYNAPTOBREVN.