UniProt Accession

 A3KFL1_HUMAN; A3KFL1 

Genbank Protein ID

 AL359092 

Genbank Nucleotide ID

  

Protein Name

 Exosome complex component RRP4 

Protein Synonyms/Alias

  

Gene Name

 EXOSC2 

Gene Synonyms/Alias

  

Created Date

 July 27, 2013 

Organism

 Homo sapiens (Human) 

NCBI Taxa ID

 9606 

Lysine Modification

Position	Peptide	Type	References
24	RLGRDTKKHLVVPGD	ubiquitination	[1]
51	GTYMGEEKLIASVAG	ubiquitination	[1]
65	GSVERVNKLICVKAL	ubiquitination	[1]
70	VNKLICVKALKTRYI	ubiquitination	[1, 2]
97	EVQQKRWKVETNSRL	ubiquitination	[1]

Reference

 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 200 AA 

Protein Sequence

Gene Ontology

 GO:0000178; C:exosome (RNase complex); IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 

Interpro

 IPR025721; Exosome_cplx_N_dom.
 IPR026699; Exosome_RNA_bind1/RRP40/RRP4.
 IPR022967; RNA-binding_domain_S1. 

Pfam

 PF14382; ECR1_N 

SMART

 SM00316; S1 

PROSITE

  

PRINTS