CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007763
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein SCD6 
Protein Synonyms/Alias
  
Gene Name
 SCD6 
Gene Synonyms/Alias
 YPR129W; P9659.10 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
36EKGTVTLKEVRCFGTacetylation[1]
216SNNAKFTKGDSTDVEacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Suppressor of clathrin deficiency. 
Sequence Annotation
 DOMAIN 193 229 DFDF.
 MOTIF 241 257 FFD box.
 MOTIF 260 280 TFG box.  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 349 AA 
Protein Sequence
MSQYIGKTIS LISVTDNRYV GLLEDIDSEK GTVTLKEVRC FGTEGRKNWG PEEIYPNPTV 60
YNSVKFNGSE VKDLSILDAN INDIQPVVPQ MMPPASQFPP QQAQSPPQAQ AQAHVQTNPQ 120
VPKPESNVPA AVAGYGVYTP TSTETATASM NDKSTPQDTN VNSQSRERGK NGENEPKYQR 180
NKNRSSNRPP QSNRNFKVDI PNEDFDFQSN NAKFTKGDST DVEKEKELES AVHKQDESDE 240
QFYNKKSSFF DTISTSTETN TNMRWQEEKM LNVDTFGQAS ARPRFHSRGL GRGRGNYRGN 300
RGNRGRGGQR GNYQNRNNYQ NDSGAYQNQN DSYSRPANQF SQPPSNVEF 349 
Gene Ontology
 GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.
 GO:0010494; C:cytoplasmic stress granule; IDA:SGD.
 GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.
 GO:0003729; F:mRNA binding; IDA:SGD.
 GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:SGD.
 GO:0045947; P:negative regulation of translational initiation; IMP:SGD.
 GO:0034063; P:stress granule assembly; IMP:SGD. 
Interpro
 IPR025762; DFDF.
 IPR019050; FDF_dom.
 IPR025761; FFD_box.
 IPR025609; Lsm14_N.
 IPR010920; LSM_dom.
 IPR025768; TFG_box. 
Pfam
 PF09532; FDF
 PF12701; LSM14 
SMART
  
PROSITE
 PS51512; DFDF
 PS51513; FFD
 PS51536; TFG 
PRINTS