CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003525
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Enamine/imine deaminase 
Protein Synonyms/Alias
  
Gene Name
 ridA 
Gene Synonyms/Alias
 yjgF; b4243; JW5755 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
38GQIPVNPKTGEVPADacetylation[1]
58RQSLDNVKAIVEAAGacetylation[1, 2]
67IVEAAGLKVGDIVKTacetylation[1]
73LKVGDIVKTTVFVKDacetylation[1]
115VEVARLPKDVKIEIEacetylation[1, 2]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Accelerates the release of ammonia from reactive enamine/imine intermediates of the PLP-dependent threonine dehydratase (IlvA) in the low water environment of the cell. It catalyzes the deamination of enamine/imine intermediates to yield 2-ketobutyrate and ammonia. It is required for the detoxification of reactive intermediates of IlvA due to their highly nucleophilic abilities. Involved in the isoleucine biosynthesis (By similarity). 
Sequence Annotation
 BINDING 105 105 Substrate (Potential).  
Keyword
 3D-structure; Amino-acid biosynthesis; Branched-chain amino acid biosynthesis; Complete proteome; Cytoplasm; Detoxification; Direct protein sequencing; Hydrolase; Isoleucine biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 128 AA 
Protein Sequence
MSKTIATENA PAAIGPYVQG VDLGNMIITS GQIPVNPKTG EVPADVAAQA RQSLDNVKAI 60
VEAAGLKVGD IVKTTVFVKD LNDFATVNAT YEAFFTEHNA TFPARSCVEV ARLPKDVKIE 120
IEAIAVRR 128 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0016020; C:membrane; IDA:UniProtKB.
 GO:0019239; F:deaminase activity; ISS:UniProtKB.
 GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
 GO:0009097; P:isoleucine biosynthetic process; IEA:UniProtKB-KW.
 GO:0009636; P:response to toxic substance; IEA:UniProtKB-KW. 
Interpro
 IPR013813; Endoribo_LPSP/chorism_mut-like.
 IPR006056; YjgF-like.
 IPR019897; YjgF-like_CS.
 IPR006175; YjgF/Yer057p/UK114. 
Pfam
 PF01042; Ribonuc_L-PSP 
SMART
  
PROSITE
 PS01094; UPF0076 
PRINTS