UniProt Accession

 Q5XFX7_RAT; Q5XFX7 

Genbank Protein ID

 AABR06097748; BC084695 

Genbank Nucleotide ID

 AAH84695.1 

Protein Name

 Protein Rad23a 

Protein Synonyms/Alias

 RAD23 homolog A (S. cerevisiae) 

Gene Name

 Rad23a 

Gene Synonyms/Alias

  

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
16	TLQQQTFKIRMEPDE	ubiquitination	[1]
47	AFPVAGQKLIYAGKI	acetylation	[2]
47	AFPVAGQKLIYAGKI	ubiquitination	[1]
62	LSDDIPIKEYHIDEK	ubiquitination	[1]

Reference

 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 351 AA 

Protein Sequence

Gene Ontology

 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0003684; F:damaged DNA binding; IEA:InterPro.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
 GO:0045070; P:positive regulation of viral genome replication; IEA:Compara.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
 GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Compara. 

Interpro

 IPR004806; Rad23.
 IPR006636; STI1_HS-bd.
 IPR009060; UBA-like.
 IPR000449; UBA/transl_elong_EF1B_N.
 IPR015940; UBA/transl_elong_EF1B_N_euk.
 IPR000626; Ubiquitin.
 IPR019955; Ubiquitin_supergroup.
 IPR015360; XPC-bd. 

Pfam

 PF00627; UBA
 PF00240; ubiquitin
 PF09280; XPC-binding 

SMART

 SM00727; STI1
 SM00165; UBA
 SM00213; UBQ 

PROSITE

 PS50030; UBA
 PS50053; UBIQUITIN_2 

PRINTS

 PR01839; RAD23PROTEIN.