CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034903
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Ddx54 
Protein Synonyms/Alias
  
Gene Name
 Ddx54 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
419YSFPAKGKLFLHRVGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 874 AA 
Protein Sequence
MAAGRRVGLG PRSHPAMAPW KKKRLRKRRT GASQARDSDS EDGEFEIQAE DDARARKLGP 60
GRALPSFPTS ECVSDVEPDT REMVRAQNKK KKKSGGFQSM GLSYPVFKGI MKKGYKVPTP 120
IQRKTIPVIL DGKDVVAMAR TGSGKTACFL LPMFERLKAR SAQTGARALI LSPTRELALQ 180
TMKFTKELGK FTGLKTALIL GGDKMEDQFA ALHENPDIII ATPGRLVHVA VEMNLKLQSV 240
EYVVFDEADR LFEMGFAEQL QEIIGRLPGG HQTVLFSATL PKLLVEFARA GLTEPVLIRL 300
DVDSKLNEQL KTSFFLVRED TKTAVLLYLL QNVVRPQDQN VVFVATKHHA EYLTELLTGQ 360
GVSCAHIYSA LDQTARKINL AKFTHNKCST LIVTDLAARG LDIPLLDNVI NYSFPAKGKL 420
FLHRVGRVAR AGRSGTAYSL VAPDEVPYLL DLHLFLGRSV TLARPHEEPS SGAVGRDGVL 480
GRVPQSVVDD EDSSLQTALQ ASLELQGLQR VANNAQQQYL RSRPAPSPES IKRAKELDLA 540
ELGLHPLFSS CFEEGELQRL RLVDSIKNYR TRTTIFEINA SSKDPSSQMM RAKRQRDRKA 600
ITSFHQGRQE RQDGPADPVP QRELPQKEEE DMVETVEGVF TEVVGQKQPR PGPNQGAKRR 660
RKEASQRDQE FYVPYRPKDF DSERGLSVSG AGGAFEQQVA GAVLDLMGDE AQNMSRGRQQ 720
LKWDRKKKRF VGQSGQEDKK KIKTESGRFI SSSYKRDLYQ KWKQKQKIDD RDSEEEGPSN 780
RRGPGPHRGG KRGRSQGGQG RWYASSVPTG HMRSELKTKE QILKQRRQAQ KQRFLQRGGL 840
KQLSARNRRR AQELRQSAFG RGAPTRKGKM RKRM 874 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR012541; DBP10CT.
 IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR027417; P-loop_NTPase.
 IPR000629; RNA-helicase_DEAD-box_CS.
 IPR014014; RNA_helicase_DEAD_Q_motif. 
Pfam
 PF08147; DBP10CT
 PF00270; DEAD
 PF00271; Helicase_C 
SMART
 SM00487; DEXDc
 SM00490; HELICc 
PROSITE
 PS00039; DEAD_ATP_HELICASE
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER
 PS51195; Q_MOTIF 
PRINTS