CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040090
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Upf3b 
Protein Synonyms/Alias
  
Gene Name
 Upf3b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
81TPLLSFLKNKQRMREubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 260 AA 
Protein Sequence
XEYHAIVEFA PFQKAAKKKI KKRDTKVGTI EDDPEYRKFL ESYATDNEKM TSTPETLLEE 60
IEAKNRELIA KRTTPLLSFL KNKQRMREEK REERRRREIE RKRQREEERR KWKEEEKRKR 120
KDIEKLKKIE RIPEREKIRD EPKIKVHRFL LQAVNQKNLL RKPEKGDEKE LDKRDKTKRL 180
DKENLNEERA SGHSYTLPRR SDVELKDEKP KRLDDEGVRD YRDRDRDYER DQERMIRERE 240
RLKRQEEERR RQQQKERYEK 260 
Gene Ontology
  
Interpro
 IPR005120; Nonsense_mediated_decay_UPF3. 
Pfam
 PF03467; Smg4_UPF3 
SMART
  
PROSITE
  
PRINTS