CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000256
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Copper chaperone for superoxide dismutase 
Protein Synonyms/Alias
 Superoxide dismutase copper chaperone 
Gene Name
 CCS 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
76TGRQAVLKGMGSGQLubiquitination[1]
189RMEDEQLKVWDVIGRubiquitination[1]
216RGGHPLSKITGNSGEubiquitination[1]
241AGLFQNPKQICSCDGubiquitination[1]
Reference
 [1] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Delivers copper to copper zinc superoxide dismutase (SOD1). 
Sequence Annotation
 DOMAIN 12 75 HMA.
 REGION 88 234 Superoxide dismutase-like.
 METAL 22 22 Copper 1.
 METAL 25 25 Copper 1.
 METAL 147 147 Zinc.
 METAL 155 155 Zinc.
 METAL 164 164 Zinc.
 METAL 167 167 Zinc.
 METAL 244 244 Copper 2.
 METAL 246 246 Copper 2.
 MOD_RES 267 267 Phosphoserine (By similarity).
 DISULFID 141 227
 CROSSLNK 76 76 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 189 189 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 216 216 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 241 241 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 3D-structure; Chaperone; Complete proteome; Copper; Cytoplasm; Disulfide bond; Isopeptide bond; Metal-binding; Phosphoprotein; Polymorphism; Reference proteome; Ubl conjugation; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 274 AA 
Protein Sequence
MASDSGNQGT LCTLEFAVQM TCQSCVDAVR KSLQGVAGVQ DVEVHLEDQM VLVHTTLPSQ 60
EVQALLEGTG RQAVLKGMGS GQLQNLGAAV AILGGPGTVQ GVVRFLQLTP ERCLIEGTID 120
GLEPGLHGLH VHQYGDLTNN CNSCGNHFNP DGASHGGPQD SDRHRGDLGN VRADADGRAI 180
FRMEDEQLKV WDVIGRSLII DEGEDDLGRG GHPLSKITGN SGERLACGII ARSAGLFQNP 240
KQICSCDGLT IWEERGRPIA GKGRKESAQP PAHL 274 
Gene Ontology
 GO:0005829; C:cytosol; IBA:RefGenome.
 GO:0005743; C:mitochondrial inner membrane; IBA:RefGenome.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0005375; F:copper ion transmembrane transporter activity; TAS:ProtInc.
 GO:0004784; F:superoxide dismutase activity; IBA:RefGenome.
 GO:0016532; F:superoxide dismutase copper chaperone activity; IBA:RefGenome.
 GO:0008270; F:zinc ion binding; IBA:RefGenome.
 GO:0015680; P:intracellular copper ion transport; IBA:RefGenome.
 GO:0051353; P:positive regulation of oxidoreductase activity; IEA:Compara.
 GO:0019430; P:removal of superoxide radicals; IBA:RefGenome. 
Interpro
 IPR006121; HeavyMe-assoc_HMA.
 IPR024134; SOD_Cu/Zn_/chaperones.
 IPR018152; SOD_Cu/Zn_BS.
 IPR024142; SOD_Cu_chaperone.
 IPR001424; SOD_Cu_Zn_dom. 
Pfam
 PF00403; HMA
 PF00080; Sod_Cu 
SMART
  
PROSITE
 PS01047; HMA_1
 PS50846; HMA_2
 PS00087; SOD_CU_ZN_1
 PS00332; SOD_CU_ZN_2 
PRINTS
 PR00068; CUZNDISMTASE.