CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040735
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 YEATS domain-containing protein 4 
Protein Synonyms/Alias
  
Gene Name
 YEATS4 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
17PDSGGRVKGVTIVKPubiquitination[1]
113QLTLGAYKHETEFAEubiquitination[1]
134EKLEAAKKKTSFEIAubiquitination[1]
144SFEIAELKERLKASRubiquitination[1, 2, 3]
158RETINCLKNEIRKLEubiquitination[1, 3]
163CLKNEIRKLEEDDQAubiquitination[3]
171LEEDDQAKDI*****ubiquitination[3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 173 AA 
Protein Sequence
MFKRMAEFGP DSGGRVKGVT IVKPIVYGNV ARYFGKKREE DGHTHQWTVY VKPYRNEVTL 60
YHLLKLFQSD TNAMLGKKTV VSEFYDEMIF QDPTAMMQQL LTTSRQLTLG AYKHETEFAE 120
LEVKTREKLE AAKKKTSFEI AELKERLKAS RETINCLKNE IRKLEEDDQA KDI 173 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR005033; YEATS. 
Pfam
  
SMART
  
PROSITE
  
PRINTS