UniProt Accession

 YHP7_YEAST; P38809; D3DL47 

Genbank Protein ID

 U00060; BK006934 

Genbank Nucleotide ID

 AAB68935.1; DAA06791.1 

Protein Name

 Uncharacterized protein YHR097C 

Protein Synonyms/Alias

  

Gene Name

 YHR097C 

Gene Synonyms/Alias

  

Created Date

 July 27, 2013 

Organism

 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 

NCBI Taxa ID

 559292 

Lysine Modification

Position	Peptide	Type	References
78	EEAAGTPKQQAPYPK	ubiquitination	[1, 2, 3, 4]
85	KQQAPYPKEKKRSSG	ubiquitination	[4]
187	VGGRTSKKSTLDEVF	ubiquitination	[1, 2, 3, 4]
218	DRAYLFNKANSSTTT	ubiquitination	[4]
230	TTTLDAIKPNSKNIT	ubiquitination	[4]
234	DAIKPNSKNITQFDS	ubiquitination	[4]
242	NITQFDSKMKTELVH	ubiquitination	[1, 2, 3, 4]
309	QVNNNNLKLVKTHSG	ubiquitination	[4]
312	NNNLKLVKTHSGHLE	ubiquitination	[4]

Reference

 [1] A proteomics approach to understanding protein ubiquitination.
 Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP.
 Nat Biotechnol. 2003 Aug;21(8):921-6. [PMID: 12872131]
 [2] Computational identification of ubiquitylation sites from protein sequences.
 Tung CW, Ho SY.
 BMC Bioinformatics. 2008 Jul 15;9:310. [PMID: 18625080]
 [3] Identification, analysis, and prediction of protein ubiquitination sites.
 Radivojac P, Vacic V, Haynes C, Cocklin RR, Mohan A, Heyen JW, Goebl MG, Iakoucheva LM.
 Proteins. 2010 Feb 1;78(2):365-80. [PMID: 19722269]
 [4] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, Villén J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301] 

Functional Description

  

Sequence Annotation

 MOD_RES 7 7 Phosphothreonine.
 MOD_RES 76 76 Phosphothreonine.
 MOD_RES 205 205 Phosphothreonine.
 MOD_RES 221 221 Phosphoserine.
 MOD_RES 223 223 Phosphothreonine.
 CROSSLNK 78 78 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 187 187 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 242 242 Glycyl lysine isopeptide (Lys-Gly)  

Keyword

 Complete proteome; Cytoplasm; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 366 AA 

Protein Sequence

Gene Ontology

 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD. 

Interpro

 IPR013226; Pal1. 

Pfam

 PF08316; Pal1 

SMART

  

PROSITE

  

PRINTS