CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002075
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 4-hydroxy-tetrahydrodipicolinate reductase 
Protein Synonyms/Alias
 HTPA reductase 
Gene Name
 dapB 
Gene Synonyms/Alias
 b0031; JW0029 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
111TGFDEAGKQAIRDAAacetylation[1]
163IEAHHRHKVDAPSGTacetylation[1, 2]
184AIAHALDKDLKDCAVacetylation[1]
187HALDKDLKDCAVYSRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. Can use both NADH and NADPH as a reductant, with NADH being twice as effective as NADPH. 
Sequence Annotation
 NP_BIND 12 17 NAD(P).
 NP_BIND 102 104 NAD(P).
 NP_BIND 126 129 NAD(P).
 REGION 169 170 Substrate binding.
 ACT_SITE 159 159 Proton donor/acceptor.
 ACT_SITE 163 163 Proton donor.
 BINDING 38 38 NAD.
 BINDING 39 39 NADP.
 BINDING 160 160 Substrate.  
Keyword
 3D-structure; Amino-acid biosynthesis; Complete proteome; Cytoplasm; Diaminopimelate biosynthesis; Direct protein sequencing; Lysine biosynthesis; NAD; NADP; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 273 AA 
Protein Sequence
MHDANIRVAI AGAGGRMGRQ LIQAALALEG VQLGAALERE GSSLLGSDAG ELAGAGKTGV 60
TVQSSLDAVK DDFDVFIDFT RPEGTLNHLA FCRQHGKGMV IGTTGFDEAG KQAIRDAAAD 120
IAIVFAANFS VGVNVMLKLL EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAH 180
ALDKDLKDCA VYSREGHTGE RVPGTIGFAT VRAGDIVGEH TAMFADIGER LEITHKASSR 240
MTFANGAVRS ALWLSGKESG LFDMRDVLDL NNL 273 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0008839; F:4-hydroxy-tetrahydrodipicolinate reductase; IEA:EC.
 GO:0051287; F:NAD binding; IEA:HAMAP.
 GO:0070402; F:NADPH binding; IEA:InterPro.
 GO:0016726; F:oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor; IEA:HAMAP.
 GO:0019877; P:diaminopimelate biosynthetic process; IDA:EcoliWiki.
 GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:HAMAP. 
Interpro
 IPR022663; DapB_C.
 IPR000846; DapB_N.
 IPR022664; DapB_N_CS.
 IPR011770; Dihydrodipicolinate_Rdtase.
 IPR023940; Dihydrodipicolinate_Rdtase_bac.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF05173; DapB_C
 PF01113; DapB_N 
SMART
  
PROSITE
 PS01298; DAPB 
PRINTS