CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004986
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Kit ligand 
Protein Synonyms/Alias
 Mast cell growth factor; MGF; Stem cell factor; SCF; c-Kit ligand; Soluble KIT ligand; sKITLG 
Gene Name
 KITLG 
Gene Synonyms/Alias
 MGF; SCF 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
128KDLKKSFKSPEPRLFubiquitination[1]
238EISMLQEKEREFQEVubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. KITLG/SCF binding can activate several signaling pathways. Promotes phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, and subsequent activation of the kinase AKT1. KITLG/SCF and KIT also transmit signals via GRB2 and activation of RAS, RAF1 and the MAP kinases MAPK1/ERK2 and/or MAPK3/ERK1. KITLG/SCF and KIT promote activation of STAT family members STAT1, STAT3 and STAT5. KITLG/SCF and KIT promote activation of PLCG1, leading to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5- trisphosphate. KITLG/SCF acts synergistically with other cytokines, probably interleukins. 
Sequence Annotation
 CARBOHYD 90 90 N-linked (GlcNAc...); partial.
 CARBOHYD 118 118 N-linked (GlcNAc...); partial.
 CARBOHYD 145 145 N-linked (GlcNAc...).
 CARBOHYD 167 167 O-linked (GalNAc...).
 CARBOHYD 168 168 O-linked (GalNAc...).
 CARBOHYD 180 180 O-linked (GalNAc...).
 CARBOHYD 195 195 N-linked (GlcNAc...) (Potential).
 DISULFID 29 114
 DISULFID 68 163  
Keyword
 3D-structure; Alternative splicing; Cell adhesion; Cell membrane; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Disease mutation; Disulfide bond; Glycoprotein; Growth factor; Membrane; Polymorphism; Reference proteome; Secreted; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 273 AA 
Protein Sequence
MKKTQTWILT CIYLQLLLFN PLVKTEGICR NRVTNNVKDV TKLVANLPKD YMITLKYVPG 60
MDVLPSHCWI SEMVVQLSDS LTDLLDKFSN ISEGLSNYSI IDKLVNIVDD LVECVKENSS 120
KDLKKSFKSP EPRLFTPEEF FRIFNRSIDA FKDFVVASET SDCVVSSTLS PEKGKAKNPP 180
GDSSLHWAAM ALPALFSLII GFAFGALYWK KRQPSLTRAV ENIQINEEDN EISMLQEKER 240
EFQEV 245 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
 GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
 GO:0005576; C:extracellular region; TAS:Reactome.
 GO:0005615; C:extracellular space; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; NAS:UniProtKB.
 GO:0005173; F:stem cell factor receptor binding; NAS:UniProtKB.
 GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
 GO:0008283; P:cell proliferation; TAS:ProtInc.
 GO:0035162; P:embryonic hemopoiesis; IDA:DFLAT.
 GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.
 GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.
 GO:0035234; P:germ cell programmed cell death; IEA:Compara.
 GO:0045087; P:innate immune response; TAS:Reactome.
 GO:0008584; P:male gonad development; IEP:UniProtKB.
 GO:0033026; P:negative regulation of mast cell apoptotic process; IEA:Compara.
 GO:0001755; P:neural crest cell migration; IEA:Compara.
 GO:0048011; P:neurotrophin TRK receptor signaling pathway; TAS:Reactome.
 GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.
 GO:0045740; P:positive regulation of DNA replication; IDA:BHF-UCL.
 GO:0043406; P:positive regulation of MAP kinase activity; IEA:Compara.
 GO:0070668; P:positive regulation of mast cell proliferation; IEA:Compara.
 GO:0045636; P:positive regulation of melanocyte differentiation; IEA:Compara.
 GO:0002763; P:positive regulation of myeloid leukocyte differentiation; IEA:Compara.
 GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IEA:Compara.
 GO:0046579; P:positive regulation of Ras protein signal transduction; IEA:Compara. 
Interpro
 IPR009079; 4_helix_cytokine-like_core.
 IPR012351; 4_helix_cytokine_core.
 IPR003452; SCF. 
Pfam
 PF02404; SCF 
SMART
  
PROSITE
  
PRINTS