CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000225
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 26S proteasome regulatory subunit RPN13 
Protein Synonyms/Alias
 Proteasome non-ATPase subunit 13 
Gene Name
 RPN13 
Gene Synonyms/Alias
 DAQ1; YLR421C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
144EEESNDEKQKAQDVDubiquitination[1]
146ESNDEKQKAQDVDVSubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Component of the 19S cap proteasome complex which acts as a regulatory subunit of the 26S proteasome, involved in the ATP-dependent degradation of ubiquitinated proteins. 
Sequence Annotation
 MOD_RES 133 133 Phosphoserine.
 MOD_RES 135 135 Phosphoserine.
 MOD_RES 140 140 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Nucleus; Phosphoprotein; Proteasome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 156 AA 
Protein Sequence
MSMSSTVIKF RAGVCEYNED SRLCTPIPVQ GEIEIKPNEE EELGFWDFEW RPTEKPVGRE 60
LDPISLILIP GETMWVPIKS SKSGRIFALV FSSNERYFFW LQEKNSGNLP LNELSAKDKE 120
IYNKMIGVLN NSSESDEEES NDEKQKAQDV DVSMQD 156 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0008541; C:proteasome regulatory particle, lid subcomplex; IDA:SGD.
 GO:0034515; C:proteasome storage granule; IDA:SGD.
 GO:0043130; F:ubiquitin binding; IDA:SGD.
 GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD. 
Interpro
 IPR006773; 26S_Psome_Ubiquitin-recp_Rpn13. 
Pfam
 PF04683; Proteasom_Rpn13 
SMART
  
PROSITE
  
PRINTS