CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000069
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Eukaryotic elongation factor 2 kinase 
Protein Synonyms/Alias
 eEF-2 kinase; eEF-2K; Calcium/calmodulin-dependent eukaryotic elongation factor 2 kinase 
Gene Name
 EEF2K 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
65KYYSNLTKSERYSSSubiquitination[1, 2]
162FLHAQQWKGASNYVAubiquitination[1, 2]
238YIEGKYIKYNSNSGFubiquitination[1, 2, 3]
341DAVNQNTKLLQSAKTubiquitination[1, 2, 3, 4, 5, 6, 7]
347TKLLQSAKTILRGTEubiquitination[1, 2, 3, 6, 7]
447DSGYPSEKRGELDDPubiquitination[4]
485SGRVCVEKWNLLNSSubiquitination[3, 5, 8, 9]
517NALDLEKKIGKSILGubiquitination[3]
603KGFDYLLKAAEAGDRubiquitination[1, 2, 3, 4, 7, 9]
705EAAMEAMKGRLANQYubiquitination[7]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [5] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [6] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [7] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [8] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [9] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Threonine kinase that regulates protein synthesis by controlling the rate of peptide chain elongation. Upon activation by a variety of upstream kinases including AMPK or TRPM7, phosphorylates the elongation factor EEF2 at a single site, renders it unable to bind ribosomes and thus inactive. In turn, the rate of protein synthesis is reduced. 
Sequence Annotation
 DOMAIN 116 326 Alpha-type protein kinase.
 NP_BIND 296 302 ATP (By similarity).
 REGION 594 610 Calmodulin-binding (Potential).
 REGION 610 627 Pseudosubstrate/autoinhibitory domain
 MOD_RES 18 18 Phosphoserine.
 MOD_RES 27 27 Phosphoserine (By similarity).
 MOD_RES 31 31 Phosphoserine (By similarity).
 MOD_RES 61 61 Phosphoserine; by autocatalysis.
 MOD_RES 66 66 Phosphoserine; by autocatalysis.
 MOD_RES 71 71 Phosphoserine (By similarity).
 MOD_RES 78 78 Phosphoserine; by autocatalysis and
 MOD_RES 348 348 Phosphothreonine; by autocatalysis.
 MOD_RES 353 353 Phosphothreonine; by autocatalysis.
 MOD_RES 359 359 Phosphoserine; by MAPK13 and CDK1.
 MOD_RES 366 366 Phosphoserine; by autocatalysis, RPS6KA1
 MOD_RES 398 398 Phosphoserine; by AMPK.
 MOD_RES 445 445 Phosphoserine; by autocatalysis.
 MOD_RES 470 470 Phosphoserine.
 MOD_RES 474 474 Phosphoserine; by autocatalysis.
 MOD_RES 477 477 Phosphoserine.
 MOD_RES 491 491 Phosphoserine; by autocatalysis.
 MOD_RES 500 500 Phosphoserine; by PKA (By similarity).  
Keyword
 ATP-binding; Calcium; Calmodulin-binding; Complete proteome; Kinase; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome; Serine/threonine-protein kinase; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 725 AA 
Protein Sequence
MADEDLIFRL EGVDGGQSPR AGHDGDSDGD SDDEEGYFIC PITDDPSSNQ NVNSKVNKYY 60
SNLTKSERYS SSGSPANSFH FKEAWKHAIQ KAKHMPDPWA EFHLEDIATE RATRHRYNAV 120
TGEWLDDEVL IKMASQPFGR GAMRECFRTK KLSNFLHAQQ WKGASNYVAK RYIEPVDRDV 180
YFEDVRLQME AKLWGEEYNR HKPPKQVDIM QMCIIELKDR PGKPLFHLEH YIEGKYIKYN 240
SNSGFVRDDN IRLTPQAFSH FTFERSGHQL IVVDIQGVGD LYTDPQIHTE TGTDFGDGNL 300
GVRGMALFFY SHACNRICES MGLAPFDLSP RERDAVNQNT KLLQSAKTIL RGTEEKCGSP 360
QVRTLSGSRP PLLRPLSENS GDENMSDVTF DSLPSSPSSA TPHSQKLDHL HWPVFSDLDN 420
MASRDHDHLD NHRESENSGD SGYPSEKRGE LDDPEPREHG HSYSNRKYES DEDSLGSSGR 480
VCVEKWNLLN SSRLHLPRAS AVALEVQRLN ALDLEKKIGK SILGKVHLAM VRYHEGGRFC 540
EKGEEWDQES AVFHLEHAAN LGELEAIVGL GLMYSQLPHH ILADVSLKET EENKTKGFDY 600
LLKAAEAGDR QSMILVARAF DSGQNLSPDR CQDWLEALHW YNTALEMTDC DEGGEYDGMQ 660
DEPRYMMLAR EAEMLFTGGY GLEKDPQRSG DLYTQAAEAA MEAMKGRLAN QYYQKAEEAW 720
AQMEE 725 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0005516; F:calmodulin binding; IDA:UniProtKB.
 GO:0004686; F:elongation factor-2 kinase activity; IDA:UniProtKB.
 GO:0008135; F:translation factor activity, nucleic acid binding; TAS:ProtInc.
 GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.
 GO:0046777; P:protein autophosphorylation; IDA:UniProtKB.
 GO:0031952; P:regulation of protein autophosphorylation; IEA:Compara.
 GO:0006414; P:translational elongation; TAS:ProtInc. 
Interpro
 IPR017400; Elongation_factor_2_kinase.
 IPR011009; Kinase-like_dom.
 IPR004166; MHCK_EF2_kinase.
 IPR006597; Sel1-like.
 IPR011990; TPR-like_helical. 
Pfam
 PF02816; Alpha_kinase
 PF08238; Sel1 
SMART
 SM00811; Alpha_kinase 
PROSITE
 PS51158; ALPHA_KINASE 
PRINTS