CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038874
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 E3 ubiquitin-protein ligase PDZRN3 
Protein Synonyms/Alias
  
Gene Name
 Pdzrn3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
158ARLGALHKALKKEALacetylation[1]
161GALHKALKKEALRAGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1039 AA 
Protein Sequence
XEDPLTTPCG HVFCAGCVLP WVVQEGSCPS RCRGRLSAKE LNHVLPLKRL ILKLDIKCAH 60
AARGCGRVVK LQDLPEHLER CDFAPARCRH AGCGQLLLRR DVEAHMRDAC DARPVGRCQE 120
GCGLPLTHGE QRAGGHCCAR ALRAHNGALQ ARLGALHKAL KKEALRAGKR EKSLVAQLAA 180
AQLELQMTAL RYQKKFTEYS ARLDSLSRCV AAPPGGKGEE TKSVTLVLHR DSGSLGFNII 240
GGRPCVDNQD GSSSEGIFVS KIVDSGPAAK EGGLQIHDRI IEVNGKDLSR ATHDQAVEAF 300
KTAKEPIVVQ VLRRTPRTKM FTPASESQLV DTGTQTDITF EHIMALTKIS SPSPPVLGPY 360
LLPEEHPSSH EYYDPNDYMG DIHQDMDREE LELEEVGLYR MNSQDKLGLT VCYRTDDEDD 420
IGIYISEIDP NSIAAKDGRI REGDRIIQIN GIEVQNREEA VALLTSEENK NFSLLIARPE 480
LQLDEGWMDD DRNDFLDDLH MDMLEEQHHQ AMQFTASVLQ QKKHEEDGGT TDTATILSNQ 540
HEKDSGVGRT DESTRNDESS EQENNGEDAT ASSNPLAGQR KLTCSQDTLG SGDLPFSNES 600
FISADCTDVD YLGIPEDECE RFRELLELKC QVQSTSPYSL YYPNSPLDAA GKGDPESVDK 660
ELELLNEELR SIELECLSIV RAHKMQQLKE QYRESWMLHH SGFRNYNTSV DVRRHELSDI 720
TELPEKSDKD SSSAYNTGES CRSTPLTLEI SPDNSLRRVA EGSSEGATAN MEAYRPSPKN 780
LLAITEDPEV STPNYNPGAK ELDPSQALEI KERRVSDGSR SPTASPKLGS AYLPSYHHSP 840
YKHAHIPAHA QHYQSYMHLI QQKSAVEYAQ SQMSLVSMCK DLNSSNSAEP RMEWKVKIRS 900
DGTRYITKRP VRDRLLRERA LKIREERSGL TTDDDAMSEM KMGRYWSKEE RKQHLVKAKE 960
QRRRREFMMQ SRLDCLKEQQ ASDDRKEMNI LELSHKKMMK KRNKKIFDNW MTIQELLTHG 1020
TKSPDGTRVY NSFLSVTTV 1039 
Gene Ontology
 GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001478; PDZ.
 IPR013323; SIAH-type.
 IPR008974; TRAF-like.
 IPR013083; Znf_RING/FYVE/PHD.
 IPR017907; Znf_RING_CS.
 IPR001293; Znf_TRAF. 
Pfam
 PF00595; PDZ 
SMART
 SM00228; PDZ 
PROSITE
 PS50106; PDZ
 PS00518; ZF_RING_1
 PS50145; ZF_TRAF 
PRINTS