CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005186
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nuclear transcription factor Y subunit alpha 
Protein Synonyms/Alias
 CAAT box DNA-binding protein subunit A; Nuclear transcription factor Y subunit A; NF-YA 
Gene Name
 NFYA 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
270EPLYVNAKQYHRILKubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters, for example in type 1 collagen, albumin and beta-actin genes. 
Sequence Annotation
 DNA_BIND 296 321 NFYA/HAP2-type.
 MOTIF 266 289 Subunit association domain (SAD).
 MOD_RES 326 326 Phosphoserine.  
Keyword
 3D-structure; Activator; Alternative splicing; Complete proteome; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 347 AA 
Protein Sequence
MEQYTANSNS STEQIVVQAG QIQQQQQGGV TAVQLQTEAQ VASASGQQVQ TLQVVQGQPL 60
MVQVSGGQLI TSTGQPIMVQ AVPGGQGQTI MQVPVSGTQG LQQIQLVPPG QIQIQGGQAV 120
QVQGQQGQTQ QIIIQQPQTA VTAGQTQTQQ QIAVQGQQVA QTAEGQTIVY QPVNADGTIL 180
QQVTVPVSGM ITIPAASLAG AQIVQTGANT NTTSSGQGTV TVTLPVAGNV VNSGGMVMMV 240
PGAGSVPAIQ RIPLPGAEML EEEPLYVNAK QYHRILKRRQ ARAKLEAEGK IPKERRKYLH 300
ESRHRHAMAR KRGEGGRFFS PKEKDSPHMQ DPNQADEEAM TQIIRVS 347 
Gene Ontology
 GO:0016602; C:CCAAT-binding factor complex; IDA:UniProtKB.
 GO:0003677; F:DNA binding; IDA:UniProtKB.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
 GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome.
 GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. 
Interpro
 IPR018362; CCAAT-binding_factor_CS.
 IPR001289; TF_CBFB. 
Pfam
 PF02045; CBFB_NFYA 
SMART
 SM00521; CBF 
PROSITE
 PS00686; NFYA_HAP2_1
 PS51152; NFYA_HAP2_2 
PRINTS
 PR00616; CCAATSUBUNTB.