CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002259
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Erythronate-4-phosphate dehydrogenase 
Protein Synonyms/Alias
  
Gene Name
 pdxB 
Gene Synonyms/Alias
 b2320; JW2317 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
48LMVRSVTKVNESLLAacetylation[1]
57NESLLAGKPIKFVGTacetylation[1]
141RLEALGIKTLLCDPPacetylation[1]
179TFHTPLFKDGPYKTLacetylation[1]
184LFKDGPYKTLHLADEacetylation[1]
192TLHLADEKLIRSLKPacetylation[1]
263AGYTLEGKARGTTQVacetylation[1]
338GIPGEFDKLRKNYLEacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate (By similarity). 
Sequence Annotation
 ACT_SITE 208 208 By similarity.
 ACT_SITE 237 237 By similarity.
 ACT_SITE 254 254 Proton donor (By similarity).
 BINDING 45 45 Substrate (By similarity).
 BINDING 66 66 Substrate (By similarity).
 BINDING 146 146 NAD (By similarity).
 BINDING 175 175 NAD; via carbonyl oxygen (By similarity).
 BINDING 232 232 NAD (By similarity).
 BINDING 257 257 NAD; via amide nitrogen (By similarity).
 BINDING 258 258 Substrate (By similarity).  
Keyword
 Complete proteome; Cytoplasm; NAD; Oxidoreductase; Pyridoxine biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 378 AA 
Protein Sequence
MKILVDENMP YARDLFSRLG EVTAVPGRPI PVAQLADADA LMVRSVTKVN ESLLAGKPIK 60
FVGTATAGTD HVDEAWLKQA GIGFSAAPGC NAIAVVEYVF SSLLMLAERD GFSLYDRTVG 120
IVGVGNVGRR LQARLEALGI KTLLCDPPRA DRGDEGDFRS LDELVQRADI LTFHTPLFKD 180
GPYKTLHLAD EKLIRSLKPG AILINACRGA VVDNTALLTC LNEGQKLSVV LDVWEGEPEL 240
NVELLKKVDI GTSHIAGYTL EGKARGTTQV FEAYSKFIGH EQHVALDTLL PAPEFGRITL 300
HGPLDQPTLK RLVHLVYDVR RDDAPLRKVA GIPGEFDKLR KNYLERREWS SLYVICDDAS 360
AASLLCKLGF NAVHHPAR 378 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0033711; F:4-phosphoerythronate dehydrogenase activity; IDA:EcoCyc.
 GO:0051287; F:NAD binding; IDA:EcoCyc.
 GO:0042823; P:pyridoxal phosphate biosynthetic process; IDA:EcoCyc.
 GO:0008615; P:pyridoxine biosynthetic process; IDA:EcoCyc. 
Interpro
 IPR006139; D-isomer_2_OHA_DH_cat_dom.
 IPR006140; D-isomer_2_OHA_DH_NAD-bd.
 IPR020921; Erythronate-4-P_DHase.
 IPR024531; Erythronate-4-P_DHase_dimer.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00389; 2-Hacid_dh
 PF02826; 2-Hacid_dh_C
 PF11890; DUF3410 
SMART
  
PROSITE
 PS00065; D_2_HYDROXYACID_DH_1
 PS00670; D_2_HYDROXYACID_DH_2
 PS00671; D_2_HYDROXYACID_DH_3 
PRINTS