CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031923
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Parkinson disease 7 domain-containing protein 1 
Protein Synonyms/Alias
 cDNA FLJ53027, highly similar to Mus musculus Parkinson disease 7 domain containing 1 (Pddc1), mRNA 
Gene Name
 PDDC1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
20WVQDFRLKAYASPAKubiquitination[1]
27KAYASPAKLESIDGAubiquitination[1, 2]
69QHFHSESKPICAVGHubiquitination[1]
124LVVEDFVKDSGACFSubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 170 AA 
Protein Sequence
MEFVDVTESN ARWVQDFRLK AYASPAKLES IDGARYHALL IPSCPGALTD LASSGSLARI 60
LQHFHSESKP ICAVGHGVAA LCCATNEDRS WVFDSYSLTG PSVCELVRAP GFARLPLVVE 120
DFVKDSGACF SASEPDAVHV VLDRHLVTGQ NASSTVPAVQ NLLFLCGSRK 170 
Gene Ontology
  
Interpro
 IPR002818; ThiJ/PfpI. 
Pfam
 PF01965; DJ-1_PfpI 
SMART
  
PROSITE
  
PRINTS