CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001349
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 WD repeat-containing protein 1 
Protein Synonyms/Alias
 Actin-interacting protein 1; AIP1 
Gene Name
 Wdr1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
7*MPYEIKKVFASLPQacetylation[1, 2]
7*MPYEIKKVFASLPQsuccinylation[2]
7*MPYEIKKVFASLPQubiquitination[3]
21QVERGVSKILGGDPKacetylation[1, 2]
21QVERGVSKILGGDPKsuccinylation[2]
28KILGGDPKGDHFLYTacetylation[4]
38HFLYTNGKCVILRNIubiquitination[3]
81ASGDISGKLRIWDTTubiquitination[3]
90RIWDTTQKEHLLKYEacetylation[2]
90RIWDTTQKEHLLKYEsuccinylation[2]
95TQKEHLLKYEYQPFAacetylation[1, 2, 4]
95TQKEHLLKYEYQPFAubiquitination[3]
104EYQPFAGKIKDIAWTacetylation[2, 4]
104EYQPFAGKIKDIAWTsuccinylation[2]
104EYQPFAGKIKDIAWTubiquitination[3]
106QPFAGKIKDIAWTEDubiquitination[3]
180FFEGPPFKFKFTIGDacetylation[5]
182EGPPFKFKFTIGDHSacetylation[1]
219QIFIYDGKTGEKVCAacetylation[4]
223YDGKTGEKVCALGESacetylation[2]
223YDGKTGEKVCALGESsuccinylation[2]
256LLSASGDKTSKIWDVacetylation[2, 4]
256LLSASGDKTSKIWDVubiquitination[3]
321RVIKGHSKSIQCLTVacetylation[1]
405YSGQGVVKLDVQPKCubiquitination[3]
480SILASTLKDEGKLLEacetylation[1, 2]
480SILASTLKDEGKLLEubiquitination[3]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [5] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758
Functional Description
 Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins (By similarity). 
Sequence Annotation
 REPEAT 56 95 WD 1.
 REPEAT 100 143 WD 2.
 REPEAT 144 184 WD 3.
 REPEAT 187 226 WD 4.
 REPEAT 232 271 WD 5.
 REPEAT 318 359 WD 6.
 REPEAT 363 401 WD 7.
 REPEAT 443 482 WD 8.
 REPEAT 487 526 WD 9.
 REPEAT 530 569 WD 10.
 REPEAT 574 605 WD 11.
 MOD_RES 28 28 N6-acetyllysine (By similarity).
 MOD_RES 81 81 N6-acetyllysine (By similarity).
 MOD_RES 95 95 N6-acetyllysine (By similarity).
 MOD_RES 115 115 N6-acetyllysine (By similarity).
 MOD_RES 238 238 Phosphotyrosine.
 MOD_RES 480 480 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Actin-binding; Cell junction; Cell projection; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Phosphoprotein; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 606 AA 
Protein Sequence
MPYEIKKVFA SLPQVERGVS KILGGDPKGD HFLYTNGKCV ILRNIDNPAI ADIYTEHAHQ 60
VVVAKYAPSG FYIASGDISG KLRIWDTTQK EHLLKYEYQP FAGKIKDIAW TEDSKRIAVV 120
GEGREKFGAV FLWDTGSSVG EITGHNKVIN SVDIKQTRPY RLATGSDDNC AAFFEGPPFK 180
FKFTIGDHSR FVNCVRFSPD GNRFATASAD GQIFIYDGKT GEKVCALGES KAHDGGIYAI 240
SWSPDSTHLL SASGDKTSKI WDVNVNSVVS TFPMGSNVLD QQLGCLWQKD HLLSISLSGY 300
INYLDKNNPS KPLRVIKGHS KSIQCLTVHR NGGKSYIYSG SHDGHINYWD SETGENDSFS 360
GKGHTNQVSR MTVNESEQLV SCSMDDTVRY TNLTLRDYSG QGVVKLDVQP KCVAVGPGGY 420
TVVVCIGQIV LLKDQKKCFS IDNPGYEPEV VAVHPGGDTV AVGGTDGNVR VYSILASTLK 480
DEGKLLEAKG PVTDVAYSHD GAFLAVCDAS KVVTVFSVAD GYSENNVFYG HHAKIVCLAW 540
SPDNEHFASG GMDMMVYVWT LSDPETKVKI QDAHRLHHVS SLAWLDEHTL VTTSHDASVK 600
EWTITY 606 
Gene Ontology
 GO:0015629; C:actin cytoskeleton; ISA:MGI.
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0042995; C:cell projection; IEA:UniProtKB-KW.
 GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
 GO:0002102; C:podosome; IEA:UniProtKB-SubCell.
 GO:0003779; F:actin binding; ISA:MGI.
 GO:0007605; P:sensory perception of sound; ISA:MGI. 
Interpro
 IPR020472; G-protein_beta_WD-40_rep.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS
 PR00320; GPROTEINBRPT.