CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023677
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Fanconi-associated nuclease 1 
Protein Synonyms/Alias
 FANCD2/FANCI-associated nuclease 1; Myotubularin-related protein 15 
Gene Name
 FAN1 
Gene Synonyms/Alias
 KIAA1018; MTMR15 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
137KSNDVVCKNQDELRNubiquitination[1]
493LVNPNGQKQQLVDAFubiquitination[1]
502QLVDAFLKLAKQRSVubiquitination[1]
592PSYTINRKTHIFQDRubiquitination[1]
628NGNWEEAKELAQCAKubiquitination[1]
720LNLHQHLKRLEPTIKubiquitination[1]
727KRLEPTIKCITEGLAubiquitination[1]
977HFKLVEVKGPNDRLSubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Nuclease required for maintenance of chromosomal stability. Plays a key role in DNA repair of DNA interstrand cross-links (ICL) by being recruited to sites of DNA damage by monoubiquitinated FANCD2. Specifically involved in repair of ICL- induced DNA breaks by being required for efficient homologous recombination, possibly in the resolution of homologous recombination intermediates. Not involved in DNA double-strand breaks resection. Has both endonuclease activity toward 5'-flaps and 5'-exonuclease activity: may act in concert with the 3'-flap- specific enzymes to unhook the ICL by cleaving the lagging-strand template. 
Sequence Annotation
 DOMAIN 895 1007 VRR-NUC.
 ZN_FING 41 67 UBZ-type.
 MOTIF 14 22 D-box.
 MOTIF 212 214 KEN box.  
Keyword
 Alternative splicing; Coiled coil; Complete proteome; Disease mutation; DNA damage; DNA repair; Endonuclease; Exonuclease; Hydrolase; Magnesium; Metal-binding; Nuclease; Nucleus; Polymorphism; Reference proteome; Ubl conjugation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1017 AA 
Protein Sequence
MMSEGKPPDK KRPRRSLSIS KNKKKASNSI ISCFNNAPPA KLACPVCSKM VPRYDLNRHL 60
DEMCANNDFV QVDPGQVGLI NSNVSMVDLT SVTLEDVTPK KSPPPKTNLT PGQSDSAKRE 120
VKQKISPYFK SNDVVCKNQD ELRNRSVKVI CLGSLASKLS RKYVKAKKSI DKDEEFAGSS 180
PQSSKSTVVK SLIDNSSEIE DEDQILENSS QKENVFKCDS LKEECIPEHM VRGSKIMEAE 240
SQKATRECEK SALTPGFSDN AIMLFSPDFT LRNTLKSTSE DSLVKQECIK EVVEKREACH 300
CEEVKMTVAS EAKIQLSDSE AKSHSSADDA SAWSNIQEAP LQDDSCLNND IPHSIPLEQG 360
SSCNGPGQTT GHPYYLRSFL VVLKTVLENE DDMLLFDEQE KGIVTKFYQL SATGQKLYVR 420
LFQRKLSWIK MTKLEYEEIA LDLTPVIEEL TNAGFLQTES ELQELSEVLE LLSAPELKSL 480
AKTFHLVNPN GQKQQLVDAF LKLAKQRSVC TWGKNKPGIG AVILKRAKAL AGQSVRICKG 540
PRAVFSRILL LFSLTDSMED EDAACGGQGQ LSTVLLVNLG RMEFPSYTIN RKTHIFQDRD 600
DLIRYAAATH MLSDISSAMA NGNWEEAKEL AQCAKRDWNR LKNHPSLRCH EDLPLFLRCF 660
TVGWIYTRIL SRFVEILQRL HMYEEAVREL ESLLSQRIYC PDSRGRWWDR LALNLHQHLK 720
RLEPTIKCIT EGLADPEVRT GHRLSLYQRA VRLRESPSCK KFKHLFQQLP EMAVQDVKHV 780
TITGRLCPQR GMCKSVFVME AGEAADPTTV LCSVEELALA HYRRSGFDQG IHGEGSTFST 840
LYGLLLWDII FMDGIPDVFR NACQAFPLDL CTDSFFTSRR PALEARLQLI HDAPEESLRA 900
WVAATWHEQE GRVASLVSWD RFTSLQQAQD LVSCLGGPVL SGVCRHLAAD FRHCRGGLPD 960
LVVWNSQSRH FKLVEVKGPN DRLSHKQMIW LAELQKLGAE VEVCHVVAVG AKSQSLS 1017 
Gene Ontology
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0008409; F:5'-3' exonuclease activity; IDA:UniProtKB.
 GO:0017108; F:5'-flap endonuclease activity; IDA:UniProtKB.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0000287; F:magnesium ion binding; TAS:UniProtKB.
 GO:0004528; F:phosphodiesterase I activity; IEA:EC.
 GO:0043130; F:ubiquitin binding; IDA:UniProtKB.
 GO:0000724; P:double-strand break repair via homologous recombination; IMP:UniProtKB.
 GO:0033683; P:nucleotide-excision repair, DNA incision; IDA:UniProtKB. 
Interpro
 IPR014883; VRR_NUC.
 IPR006642; Znf_Rad18_put. 
Pfam
 PF08774; VRR_NUC 
SMART
 SM00990; VRR_NUC
 SM00734; ZnF_Rad18 
PROSITE
  
PRINTS