CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042794
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nucleolar protein 56 
Protein Synonyms/Alias
  
Gene Name
 NOP56 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
14ELTMDGAKAKAILDAubiquitination[1, 2]
16TMDGAKAKAILDASRubiquitination[2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 252 AA 
Protein Sequence
XLEKLEELTM DGAKAKAILD ASRSSMGMDI SAIDLINIES FSSRVVSLSE YRQSLHTYLR 60
SKMSQVAPSL SALIGEAVGA RLIAHAGSLT NLAKYPASTV QILGAEKALF RALKTRGNTP 120
KYGLIFHSTF IGRAAAKNKG RISRYLANKC SIASRIDCFS EVPTSVFGEK LREQVEERLS 180
FYETGEIPRK NLDVMKEAMV QAEEAAAEIT RKLEKQEKKR LKKEKKRLAA LALASSENSS 240
STPEECEEGD RC 252 
Gene Ontology
  
Interpro
 IPR002687; Nop_dom. 
Pfam
 PF01798; Nop 
SMART
  
PROSITE
 PS51358; NOP 
PRINTS