CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-036321
UniProt Accession
D6RGZ6_HUMAN
;
D6RGZ6
Genbank Protein ID
AC016568
;
AC026696
Genbank Nucleotide ID
Protein Name
Versican core protein
Protein Synonyms/Alias
Gene Name
VCAN
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
98
IKIGQDY
K
GRVSVPT
ubiquitination
[1]
Reference
[1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
Mol Cell. 2011 Oct 21;44(2):325-40. [
PMID: 21906983
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Disulfide bond; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
1240 AA
Protein Sequence
MFINIKSILW MCSTLIVTHA LHKVKVGKSP PVRGSLSGKV SLPCHFSTMP TLPPSYNTSE 60
FLRIKWSKIE VDKNGKDLKE TTVLVAQNGN IKIGQDYKGR VSVPTHPEAV GDASLTVVKL 120
LASDAGLYRC DVMYGIEDTQ DTVSLTVDGV VFHYRAATSR YTLNFEAAQK ACLDVGAVIA 180
TPEQLFAAYE DGFEQCDAGW LADQTVRYPI RAPRVGCYGD KMGKAGVRTY GFRSPQETYD 240
VYCYVDHLDG DVFHLTVPSK FTFEEAAKEC ENQDARLATV GELQAAWRNG FDQCDYGWLS 300
DASVRHPVTV ARAQCGGGLL GVRTLYRFEN QTGFPPPDSR FDAYCFKRRM SDLSVIGHPI 360
DSESKEDEPC SEETDPVHDL MAEILPEFPD IIEIDLYHSE ENEEEEEECA NATDVTTTPS 420
VQYINGKHLV TTVPKDPEAA EARRGQFESV APSQNFSDSS ESDTHPFVIA KTELSTAVQP 480
NESTETTESL EVTWKPETYP ETSEHFSGGE PDVFPTVPFH EEFESGTAKK GAESVTERDT 540
EVGHQAHEHT EPVSLFPEES SGEIAIDQES QKIAFARATE VTFGEEVEKS TSVTYTPTIV 600
PSSASAYVSE EEAVTLIGNP WPDDLLSTKE SWVEATPRQV VELSGSSSIP ITEGSGEAEE 660
DEDTMFTMVT DLSQRNTTDT LITLDTSRII TESFFEVPAT TIYPVSEQPS AKVVPTKFVS 720
ETDTSEWISS TTVEEKKRKE EEGTTGTAST FEVYSSTQRS DQLILPFELE SPNVATSSDS 780
GTRKSFMSLT TPTQSEREMT DSTPVFTETN TLENLGAQTT EHSSIHQPGV QEGLTTLPRS 840
PASVFMEQGS GEAAADPETT TVSSFSLNVE YAIQAEKEVA GTLSPHVETT FSTEPTGLVL 900
STVMDRVVAE NITQTSREIV ISERLGEPNY GAEIRGFSTG FPLEEDFSGD FREYSTVSHP 960
IAKEETVMME GSGDAAFRDT QTSPSTVPTS VHISHISDSE GPSSTMVSTS AFPWEEFTSS 1020
AEGSGEQLVT VSSSVVPVLP SAVQKFSGTA SSIIDEGLGE VGTVNEIDRR STILPTAEVE 1080
GTKAPVEKEE VKVSGTVSTN FPQTIEPAKL WSRQEVNPVR QEIESETTSE EQIQEEKSFE 1140
SPQNSPATEQ TIFDSQTFTE TELKTTDYSV LTTKKTYSDD KEMKEEDTSL VNMSTPDPDA 1200
NGLESYTTLP EATEKSHFFL ATALVTESIP AEHVVTDSPI 1240
Gene Ontology
GO:0005540
; F:hyaluronic acid binding; IEA:InterPro.
GO:0007155
; P:cell adhesion; IEA:InterPro.
Interpro
IPR016186
; C-type_lectin-like.
IPR016187
; C-type_lectin_fold.
IPR007110
; Ig-like_dom.
IPR013783
; Ig-like_fold.
IPR003599
; Ig_sub.
IPR013106
; Ig_V-set.
IPR000538
; Link.
Pfam
PF07686
; V-set
PF00193
; Xlink
SMART
SM00409
; IG
SM00445
; LINK
PROSITE
PS50835
; IG_LIKE
PS01241
; LINK_1
PS50963
; LINK_2
PRINTS
PR01265
; LINKMODULE.