CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029903
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Very long-chain-specific acyl-CoA dehydrogenase, mitochondrial 
Protein Synonyms/Alias
  
Gene Name
 Acadvl 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
58SFAVGMFKGQLTIDQacetylation[1]
100EEVNDPAKNDALEKVacetylation[1, 2]
100EEVNDPAKNDALEKVubiquitination[3]
106AKNDALEKVEDDTLQacetylation[1, 2, 4, 5, 6]
106AKNDALEKVEDDTLQsuccinylation[6]
106AKNDALEKVEDDTLQubiquitination[3]
174GILLYGTKAQREKYLacetylation[6]
174GILLYGTKAQREKYLsuccinylation[6]
218AIPSPCGKYYTLNGSacetylation[1, 5, 6, 7, 8]
218AIPSPCGKYYTLNGSsuccinylation[6]
218AIPSPCGKYYTLNGSubiquitination[3]
247VFAKTPIKDAATGAVacetylation[5, 6]
247VFAKTPIKDAATGAVsuccinylation[6]
247VFAKTPIKDAATGAVubiquitination[3]
255DAATGAVKEKITAFVacetylation[1, 5, 6, 8]
255DAATGAVKEKITAFVsuccinylation[6]
255DAATGAVKEKITAFVsuccinylation[6]
257ATGAVKEKITAFVVEacetylation[1, 5, 6]
257ATGAVKEKITAFVVEsuccinylation[6]
277VTHGLPEKKMGIKASacetylation[1, 5]
277VTHGLPEKKMGIKASubiquitination[3]
295EVYFDGVKVPSENVLacetylation[1, 5]
295EVYFDGVKVPSENVLubiquitination[3]
310GEVGDGFKVAVNILNacetylation[4, 5, 6, 8]
310GEVGDGFKVAVNILNsuccinylation[6]
310GEVGDGFKVAVNILNubiquitination[9]
337TMKSLIAKAVDHATNacetylation[5, 7, 10]
337TMKSLIAKAVDHATNubiquitination[3]
351NRTQFGDKIHNFGVIacetylation[1, 5, 6]
351NRTQFGDKIHNFGVIsuccinylation[6]
351NRTQFGDKIHNFGVIubiquitination[3]
361NFGVIQEKLARMAILacetylation[10]
461QGCMDKGKELTGLGNacetylation[5, 6]
461QGCMDKGKELTGLGNsuccinylation[6]
486LLMGEAGKQLRRRTGubiquitination[3]
529FATVVEAKLVKHKKGacetylation[5, 8]
535AKLVKHKKGIVNEQFacetylation[5, 6]
535AKLVKHKKGIVNEQFsuccinylation[6]
579YPTAQHEKMLCDSWCacetylation[1]
618RNFRSISKAMVENGGacetylation[1, 6]
618RNFRSISKAMVENGGsuccinylation[6]
Reference
 [1] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [4] Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice.
 Fritz KS, Galligan JJ, Hirschey MD, Verdin E, Petersen DR.
 J Proteome Res. 2012 Mar 2;11(3):1633-43. [PMID: 22309199]
 [5] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [6] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [7] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [8] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [9] A proteomics approach to identify the ubiquitinated proteins in mouse heart.
 Jeon HB, Choi ES, Yoon JH, Hwang JH, Chang JW, Lee EK, Choi HW, Park ZY, Yoo YJ.
 Biochem Biophys Res Commun. 2007 Jun 8;357(3):731-6. [PMID: 17451654]
 [10] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 634 AA 
Protein Sequence
MQSARMTPSV GRQLLRLGAR SSRSTTVLQG QPRPISAQRL YAREATQESK SFAVGMFKGQ 60
LTIDQVFPYP SVLSEEQAQF LKELVGPVAR FFEEVNDPAK NDALEKVEDD TLQGLKELGA 120
FGLQVPSELG GLGLSNTQYA RLAEIVGMHD LGVSVTLGAH QSIGFKGILL YGTKAQREKY 180
LPRVASGQAL AAFCLTEPSS GSDVASIRSS AIPSPCGKYY TLNGSKIWIS NGGLADIFTV 240
FAKTPIKDAA TGAVKEKITA FVVERSFGGV THGLPEKKMG IKASNTSEVY FDGVKVPSEN 300
VLGEVGDGFK VAVNILNNGR FGMAATLAGT MKSLIAKAVD HATNRTQFGD KIHNFGVIQE 360
KLARMAILQY VTESMAYMLS ANMDQGFKDF QIEAAISKIF CSEAAWKVAD ECIQIMGGMG 420
FMKEPGVERV LRDIRIFRIF EGANDILRLF VALQGCMDKG KELTGLGNAL KNPFGNVGLL 480
MGEAGKQLRR RTGIGSGLSL SGIVHPELSR SGELAVQALD QFATVVEAKL VKHKKGIVNE 540
QFLLQRLADG AIDLYAMVVV LSRASRSLSE GYPTAQHEKM LCDSWCIEAA TRIRENMASL 600
QSSPQHQELF RNFRSISKAM VENGGLVTGN PLGI 634 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0003995; F:acyl-CoA dehydrogenase activity; IEA:InterPro.
 GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro. 
Interpro
 IPR006089; Acyl-CoA_DH_CS.
 IPR006092; Acyl-CoA_DH_N.
 IPR006090; Acyl-CoA_Oxase/DH_1.
 IPR006091; Acyl-CoA_Oxase/DH_cen-dom.
 IPR009075; AcylCo_DH/oxidase_C.
 IPR013786; AcylCoA_DH/ox_N.
 IPR009100; AcylCoA_DH/oxidase. 
Pfam
 PF00441; Acyl-CoA_dh_1
 PF02770; Acyl-CoA_dh_M
 PF02771; Acyl-CoA_dh_N 
SMART
  
PROSITE
 PS00072; ACYL_COA_DH_1
 PS00073; ACYL_COA_DH_2 
PRINTS