CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004700
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cystathionine gamma-lyase 
Protein Synonyms/Alias
 Cysteine-protein sulfhydrase; Gamma-cystathionase; Probasin-related antigen; PRB-RA 
Gene Name
 Cth 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
140FVDCSKTKLLEAAITacetylation[1]
164TPTNPTLKLADIKACacetylation[1]
259YLCCRGLKTLQIRMEacetylation[1]
287ESNPRVEKVIYPGLPacetylation[1]
303HPQHELAKRQCTGCPacetylation[1]
329QHAQVFLKNIKLFALacetylation[1]
383SVGLEDEKDLLEDLGacetylation[1]
394EDLGQALKAAHP***acetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Catalyzes the last step in the trans-sulfuration pathway from methionine to cysteine. Has broad substrate specificity. Converts cystathionine to cysteine, ammonia and 2-oxobutanoate. Converts two cysteine molecules to lanthionine and hydrogen sulfide. Can also accept homocysteine as substrate. Specificity depends on the levels of the endogenous substrates. Generates the endogenous signaling molecule hydrogen sulfide (H2S), and so contributes to the regulation of blood pressure. Acts as a cysteine-protein sulfhydrase by mediating sulfhydration of target proteins: sulfhydration consists of converting -SH groups into -SSH on specific cysteine residues of target proteins such as GAPDH, PTPN1 and NF-kappa-B subunit RELA, thereby regulating their function (By similarity). 
Sequence Annotation
 BINDING 61 61 Substrate (By similarity).
 BINDING 113 113 Substrate (By similarity).
 BINDING 118 118 Substrate (By similarity).
 BINDING 338 338 Substrate (By similarity).
 MOD_RES 211 211 N6-(pyridoxal phosphate)lysine.
 MOD_RES 376 376 Phosphoserine (By similarity).  
Keyword
 Amino-acid biosynthesis; Calmodulin-binding; Complete proteome; Cysteine biosynthesis; Cytoplasm; Direct protein sequencing; Lyase; Phosphoprotein; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 398 AA 
Protein Sequence
MQKDASSSGF LPSFQHFATQ AIHVGPEPEQ WSSRAVVLPI SLATTFKQDS PGQSSGFVYS 60
RSGNPTRNCL EKAVAALDGA KHCLTFARGL AATTTITHLL KAGDEVICMD EVYGGTNRYF 120
RRVASEFGLK ISFVDCSKTK LLEAAITPQT KLVWIETPTN PTLKLADIKA CAQIVHKHKD 180
IILVVDNTFM SAYFQRPLAL GADICMCSAT KYMNGHSDVV MGLVSVTSDD LNERLRFLQN 240
SLGAVPSPFD CYLCCRGLKT LQIRMEKHFR NGMAVARFLE SNPRVEKVIY PGLPSHPQHE 300
LAKRQCTGCP GMVSFYIKGT LQHAQVFLKN IKLFALAESL GGYESLAELP AIMTHASVPE 360
KDRATLGISD TLIRLSVGLE DEKDLLEDLG QALKAAHP 398 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0004121; F:cystathionine beta-lyase activity; IDA:RGD.
 GO:0004123; F:cystathionine gamma-lyase activity; ISS:UniProtKB.
 GO:0080146; F:L-cysteine desulfhydrase activity; IEA:EC.
 GO:0044540; F:L-cystine L-cysteine-lyase (deaminating); ISS:UniProtKB.
 GO:0030170; F:pyridoxal phosphate binding; ISS:UniProtKB.
 GO:0019344; P:cysteine biosynthetic process; ISS:UniProtKB.
 GO:0006749; P:glutathione metabolic process; IMP:RGD.
 GO:0070814; P:hydrogen sulfide biosynthetic process; ISS:UniProtKB.
 GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.
 GO:0030308; P:negative regulation of cell growth; IMP:RGD.
 GO:0008285; P:negative regulation of cell proliferation; IMP:RGD.
 GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.
 GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:UniProtKB.
 GO:0044524; P:protein sulfhydration; ISS:UniProtKB.
 GO:0018272; P:protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine; ISS:UniProtKB.
 GO:0019346; P:transsulfuration; TAS:RGD. 
Interpro
 IPR000277; Cys/Met-Metab_PyrdxlP-dep_enz.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF01053; Cys_Met_Meta_PP 
SMART
  
PROSITE
 PS00868; CYS_MET_METAB_PP 
PRINTS