CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035156
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Uncharacterized protein 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
156AANKAIEKMNGMLLNacetylation[1]
187AELGAKAKEFTNVYIubiquitination[2]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 642 AA 
Protein Sequence
MNAAASSYPM ASLYVGDLHS DVTEVMLYEK FSPVGPVLSI RVCRDMIIRR SLGYAYVNFQ 60
QPADAERALD TMNFDVIKGK PIRICSQRDP SLRKSGVGNV FIKSLDKSID NKALYDTFSA 120
FGNILSCKVV CDENGSKGYA FVHFETQEAA NKAIEKMNGM LLNDRKVFVG RFKSRKKREA 180
ELGAKAKEFT NVYIKNFGEE VDDENLRELF SQFGKTLSVK VMRDCSGKSK GFGFVSYEKH 240
EDARKAVEEM NGKEMSGKSI FVGRAQKKVE RQAELKRKFE QLKQELKRYQ GVNLYIKNLD 300
DTIDDEKLRK EFSPFGSITS TKVMLEDGRS KGFGFDCFSS PEEATKAVTE MNGRIVGSKP 360
LYVALAQRKE EWKAHLTNQY MQRVAGMRAL PANAILNQFQ PAAGGYFVPA VPQAQGRPPY 420
YTPNQLAQMR PNRRWQQGGR PQGFQGMPSA LRQSGPRPAL RHLAPTGSEC PDRLAMDFGG 480
AGAAQQGLTD SCQSGGVPTA VPNLAPRATV AAAAPRAVAP YKYASNVRSP HPAIQPLQAP 540
QPAVHVQGQE PLTASMLAAA PPQEQKQMLG ERLFPLIQTM HSNLAGKITG MLLEIDNSEL 600
LHMLESPESL RSKVDEAVAV LQAHHAKKEA AQKVGTVAAA TS 642 
Gene Ontology
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR006515; PABP_1234.
 IPR002004; PABP_HYD.
 IPR000504; RRM_dom. 
Pfam
 PF00658; PABP
 PF00076; RRM_1 
SMART
 SM00517; PolyA
 SM00360; RRM 
PROSITE
 PS51309; PABC
 PS50102; RRM 
PRINTS