CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003404
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Inosine-5'-monophosphate dehydrogenase 
Protein Synonyms/Alias
 IMP dehydrogenase; IMPD; IMPDH 
Gene Name
 guaB 
Gene Synonyms/Alias
 guaR; b2508; JW5401 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
36DLSTQLTKTIRLNIPacetylation[1]
72GGIGFIHKNMSIERQacetylation[1]
110TTTLREVKELTERNGacetylation[1]
156VSVYMTPKERLVTVRacetylation[1]
203ITVKDFQKAERKPNAacetylation[1, 2]
267RIRETRAKYPDLQIIacetylation[1, 3]
396GSLGAMSKGSSDRYFacetylation[1]
411QSDNAADKLVPEGIEacetylation[1]
428VAYKGRLKEIIHQQMacetylation[1, 3, 4]
479VHDVTITKESPNYRLacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508]
 [3] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842]
 [4] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity). 
Sequence Annotation
 DOMAIN 93 149 CBS 1.
 DOMAIN 153 214 CBS 2.
 NP_BIND 248 250 NAD (By similarity).
 NP_BIND 298 300 NAD (By similarity).
 REGION 338 340 IMP binding (By similarity).
 REGION 361 362 IMP binding (By similarity).
 REGION 385 389 IMP binding (By similarity).
 ACT_SITE 305 305 Thioimidate intermediate (By similarity).
 METAL 300 300 Potassium; via carbonyl oxygen (By
 METAL 302 302 Potassium; via carbonyl oxygen (By
 METAL 305 305 Potassium; via carbonyl oxygen (By
 METAL 469 469 Potassium; via carbonyl oxygen; shared
 METAL 470 470 Potassium; via carbonyl oxygen; shared
 METAL 471 471 Potassium; via carbonyl oxygen; shared
 BINDING 248 248 NAD (By similarity).
 BINDING 303 303 IMP (By similarity).
 BINDING 415 415 IMP (By similarity).
 MOD_RES 267 267 N6-acetyllysine.
 MOD_RES 428 428 N6-acetyllysine.  
Keyword
 Acetylation; CBS domain; Complete proteome; Direct protein sequencing; GMP biosynthesis; Metal-binding; NAD; Oxidoreductase; Potassium; Purine biosynthesis; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 488 AA 
Protein Sequence
MLRIAKEALT FDDVLLVPAH STVLPNTADL STQLTKTIRL NIPMLSAAMD TVTEARLAIA 60
LAQEGGIGFI HKNMSIERQA EEVRRVKKHE SGVVTDPQTV LPTTTLREVK ELTERNGFAG 120
YPVVTEENEL VGIITGRDVR FVTDLNQPVS VYMTPKERLV TVREGEAREV VLAKMHEKRV 180
EKALVVDDEF HLIGMITVKD FQKAERKPNA CKDEQGRLRV GAAVGAGAGN EERVDALVAA 240
GVDVLLIDSS HGHSEGVLQR IRETRAKYPD LQIIGGNVAT AAGARALAEA GCSAVKVGIG 300
PGSICTTRIV TGVGVPQITA VADAVEALEG TGIPVIADGG IRFSGDIAKA IAAGASAVMV 360
GSMLAGTEES PGEIELYQGR SYKSYRGMGS LGAMSKGSSD RYFQSDNAAD KLVPEGIEGR 420
VAYKGRLKEI IHQQMGGLRS CMGLTGCGTI DELRTKAEFV RISGAGIQES HVHDVTITKE 480
SPNYRLGS 488 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0042802; F:identical protein binding; IDA:EcoCyc.
 GO:0003938; F:IMP dehydrogenase activity; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:HAMAP.
 GO:0000166; F:nucleotide binding; IEA:HAMAP.
 GO:0006177; P:GMP biosynthetic process; IEA:HAMAP. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR000644; Cysta_beta_synth_core.
 IPR005990; IMP_DH.
 IPR015875; IMP_DH/GMP_Rdtase_CS.
 IPR001093; IMP_DH_GMPRt. 
Pfam
 PF00571; CBS
 PF00478; IMPDH 
SMART
 SM00116; CBS 
PROSITE
 PS51371; CBS
 PS00487; IMP_DH_GMP_RED 
PRINTS