Tag | Content |
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CPLM ID | CPLM-004968 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | ATP-dependent RNA helicase SrmB |
Protein Synonyms/Alias | |
Gene Name | srmB |
Gene Synonyms/Alias | rbaB; b2576; JW2560 |
Created Date | July 27, 2013 |
Organism | Escherichia coli (strain K12) |
NCBI Taxa ID | 83333 |
Lysine Modification | Position | Peptide | Type | References |
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142 | GRLLQYIKEENFDCR | acetylation | [1] | 244 | ALLVHLLKQPEATRS | acetylation | [1] | 345 | RTARAGRKGTAISLV | acetylation | [1] | 362 | HDHLLLGKVGRYIEE | acetylation | [1] | 372 | RYIEEPIKARVIDEL | acetylation | [1] |
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Reference | [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli. Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C. Mol Cell. 2013 Jul 25;51(2):265-72. [ PMID: 23830618] |
Functional Description | Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA. |
Sequence Annotation | DOMAIN 35 209 Helicase ATP-binding. DOMAIN 238 387 Helicase C-terminal. NP_BIND 48 55 ATP (By similarity). MOTIF 4 32 Q motif. MOTIF 157 160 DEAD box. |
Keyword | 3D-structure; ATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Reference proteome; RNA-binding. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 444 AA |
Protein Sequence | MTVTTFSELE LDESLLEALQ DKGFTRPTAI QAAAIPPALD GRDVLGSAPT GTGKTAAYLL 60 PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVSDHARELA KHTHLDIATI TGGVAYMNHA 120 EVFSENQDIV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IEHIAGETRW 180 RKQTLLFSAT LEGDAIQDFA ERLLEDPVEV SANPSTRERK KIHQWYYRAD DLEHKTALLV 240 HLLKQPEATR SIVFVRKRER VHELANWLRE AGINNCYLEG EMVQGKRNEA IKRLTEGRVN 300 VLVATDVAAR GIDIPDVSHV FNFDMPRSGD TYLHRIGRTA RAGRKGTAIS LVEAHDHLLL 360 GKVGRYIEEP IKARVIDELR PKTRAPSEKQ TGKPSKKVLA KRAEKKKAKE KEKPRVKKRH 420 RDTKNIGKRR KPSGTGVPPQ TTEE 444 |
Gene Ontology | GO:0030687; C:preribosome, large subunit precursor; IDA:EcoCyc. GO:0005524; F:ATP binding; IEA:UniProtKB-KW. GO:0004004; F:ATP-dependent RNA helicase activity; IDA:EcoCyc. GO:0033592; F:RNA strand annealing activity; IDA:EcoCyc. GO:0000027; P:ribosomal large subunit assembly; IMP:EcoCyc. |
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