CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031148
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 
Protein Synonyms/Alias
 cDNA FLJ59393, highly similar to Procollagen-lysine,2-oxoglutarate5-dioxygenase 1 (EC 1.14.11.4); cDNA, FLJ79184, highly similar to Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 (EC 1.14.11.4) 
Gene Name
 PLOD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
448RLLIQQNKNVIAPLMubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Collagen; Complete proteome; Dioxygenase; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 774 AA 
Protein Sequence
MRPLLLLALL GWLLLAEAKG DAKPEAPCCQ EGLRAGGSGS LHLGRDFTVL AGARGSPSPS 60
VSSIPRFWIP GSDNLLVLTV ATKETEGFRR FKRSAQFFNY KIQALGLGED WNVEKGTSAG 120
GGQKVRLLKK ALEKHADKED LVILFADSYD VLFASGPREL LKKFRQARSQ VVFSAEELIY 180
PDRRLETKYP VVSDGKRFLG SGGFIGYAPN LSKLVAEWEG QDSDSDQLFY TKIFLDPEKR 240
EQINITLDHR CRIFQNLDGA LDEVVLKFEM GHVRARNLAY DTLPVLIHGN GPTKLQLNYL 300
GNYIPRFWTF ETGCTVCDEG LRSLKGIGDE ALPTVLVGVF IEQPTPFVSL FFQRLLRLHY 360
PQKHMRLFIH NHEQHHKAQV EEFLAQHGSE YQSVKLVGPE VRMANADARN MGADLCRQDR 420
SCTYYFSVDA DVALTEPNSL RLLIQQNKNV IAPLMTRHGR LWSNFWGALS ADGYYARSED 480
YVDIVQGRRV GVWNVPYISN IYLIKGSALR GELQSSDLFH HSKLDPDMAF CANIRQQDVF 540
MFLTNRHTLG HLLSLDSYRT THLHNDLWEV FSNPEDWKEK YIHQNYTKAL AGKLVETPCP 600
DVYWFPIFTE VACDELVEEM EHFGQWSLGN NKDNRIQGGY ENVPTIDIHM NQIGFEREWH 660
KFLLEYIAPM TEKLYPGYYT RAQFDLAFVV RYKPDEQPSL MPHHDASTFT INIALNRVGV 720
DYEGGGCRFL RYNCSIRAPR KGWTLMHPGR LTHYHEGLPT TRGTRYIAVS FVDP 774 
Gene Ontology
 GO:0005581; C:collagen; IEA:UniProtKB-KW.
 GO:0005783; C:endoplasmic reticulum; IEA:InterPro.
 GO:0005506; F:iron ion binding; IEA:InterPro.
 GO:0031418; F:L-ascorbic acid binding; IEA:InterPro.
 GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
 GO:0008475; F:procollagen-lysine 5-dioxygenase activity; IEA:InterPro. 
Interpro
 IPR005123; Oxoglu/Fe-dep_dioxygenase.
 IPR006620; Pro_4_hyd_alph.
 IPR001006; Procol_lys_dOase. 
Pfam
 PF03171; 2OG-FeII_Oxy 
SMART
 SM00702; P4Hc 
PROSITE
 PS51471; FE2OG_OXY
 PS01325; LYS_HYDROXYLASE 
PRINTS