CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-024276
UniProt Accession
RS6_MYCS2
;
A0R7F9
;
I7GGR9
Genbank Protein ID
CP000480
;
CP001663
Genbank Nucleotide ID
ABK72345.1
;
AFP43139.1
Protein Name
30S ribosomal protein S6
Protein Synonyms/Alias
Gene Name
rpsF
Gene Synonyms/Alias
MSMEG_6897; MSMEI_6713
Created Date
July 27, 2013
Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
NCBI Taxa ID
246196
Lysine Modification
Position
Peptide
Type
References
33
KDGGTVD
K
VDIWGRR
pupylation
[1]
Reference
[1] Expansion of the mycobacterial "PUPylome".
Watrous J, Burns K, Liu WT, Patel A, Hook V, Bafna V, Barry CE 3rd, Bark S, Dorrestein PC.
Mol Biosyst. 2010 Feb;6(2):376-85. [
PMID: 20094657
]
Functional Description
Binds together with S18 to 16S ribosomal RNA (By similarity).
Sequence Annotation
CROSSLNK 33 33 Isoglutamyl lysine isopeptide (Lys-Gln)
Keyword
Complete proteome; Isopeptide bond; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; Ubl conjugation.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
90 AA
Protein Sequence
MVILDPTLDE RTVAPSLETF LNVIRKDGGT VDKVDIWGRR RLAYEIAKHA EGIYAVIDVK 60
AEPATVSELD RQLNLNESVL RTKVLRTDKH 90
Gene Ontology
GO:0005840
; C:ribosome; IEA:UniProtKB-KW.
GO:0019843
; F:rRNA binding; IEA:HAMAP.
GO:0003735
; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412
; P:translation; IEA:HAMAP.
Interpro
IPR000529
; Ribosomal_S6.
IPR020815
; Ribosomal_S6_CS.
IPR020814
; Ribosomal_S6_plastid/chlpt.
IPR014717
; Transl_elong_EF1B/ribosomal_S6.
Pfam
PF01250
; Ribosomal_S6
SMART
PROSITE
PS01048
; RIBOSOMAL_S6
PRINTS