CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017912
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Josephin-2 
Protein Synonyms/Alias
 Josephin domain-containing protein 2 
Gene Name
 JOSD2 
Gene Synonyms/Alias
 SBBI54 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
142VYYNLDSKLRAPEALubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Cleaves 'Lys-63'-linked poly-ubiquitin chains, and with lesser efficiency 'Lys-48'-linked poly-ubiquitin chains (in vitro). May act as a deubiquitinating enzyme. 
Sequence Annotation
 DOMAIN 11 188 Josephin.
 ACT_SITE 24 24 Nucleophile (By similarity).
 ACT_SITE 125 125 Proton acceptor (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Hydrolase; Protease; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 188 AA 
Protein Sequence
MSQAPGAQPS PPTVYHERQR LELCAVHALN NVLQQQLFSQ EAADEICKRL APDSRLNPHR 60
SLLGTGNYDV NVIMAALQGL GLAAVWWDRR RPLSQLALPQ VLGLILNLPS PVSLGLLSLP 120
LRRRHWVALR QVDGVYYNLD SKLRAPEALG DEDGVRAFLA AALAQGLCEV LLVVTKEVEE 180
KGSWLRTD 188 
Gene Ontology
 GO:0008242; F:omega peptidase activity; IEA:InterPro.
 GO:0004843; F:ubiquitin-specific protease activity; IDA:UniProtKB.
 GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW. 
Interpro
 IPR006155; Josephin. 
Pfam
 PF02099; Josephin 
SMART
  
PROSITE
 PS50957; JOSEPHIN 
PRINTS
 PR01233; JOSEPHIN.