CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008800
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 U3 small nucleolar ribonucleoprotein protein IMP4 
Protein Synonyms/Alias
 U3 snoRNP protein IMP4; Interacting with MPP10 protein 4 
Gene Name
 IMP4 
Gene Synonyms/Alias
 YNL075W; N2353 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
28QDSQLQQKRQIIKQAubiquitination[1]
40KQALAQGKPLPKELAubiquitination[1]
54AEDESLQKDFRYDQSacetylation[2]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing. 
Sequence Annotation
 DOMAIN 86 267 Brix.  
Keyword
 Complete proteome; Nucleus; Reference proteome; Ribonucleoprotein; Ribosome biogenesis; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 290 AA 
Protein Sequence
MLRRQARERR EYLYRKAQEL QDSQLQQKRQ IIKQALAQGK PLPKELAEDE SLQKDFRYDQ 60
SLKESEEADD LQVDDEYAAT SGIMDPRIIV TTSRDPSTRL SQFAKEIKLL FPNAVRLNRG 120
NYVMPNLVDA CKKSGTTDLV VLHEHRGVPT SLTISHFPHG PTAQFSLHNV VMRHDIINAG 180
NQSEVNPHLI FDNFTTALGK RVVCILKHLF NAGPKKDSER VITFANRGDF ISVRQHVYVR 240
TREGVEIAEV GPRFEMRLFE LRLGTLENKD ADVEWQLRRF IRTANKKDYL 290 
Gene Ontology
 GO:0034457; C:Mpp10 complex; IDA:SGD.
 GO:0032040; C:small-subunit processome; IDA:SGD.
 GO:0042134; F:rRNA primary transcript binding; IPI:SGD.
 GO:0043047; F:single-stranded telomeric DNA binding; IDA:SGD.
 GO:0030515; F:snoRNA binding; IDA:SGD.
 GO:0006364; P:rRNA processing; TAS:SGD. 
Interpro
 IPR004154; Anticodon-bd.
 IPR007109; Brix. 
Pfam
 PF04427; Brix 
SMART
 SM00879; Brix 
PROSITE
 PS50833; BRIX 
PRINTS