CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015094
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RGM domain family member B 
Protein Synonyms/Alias
 DRG11-responsive axonal guidance and outgrowth of neurite; DRAGON 
Gene Name
 RGMB 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
175DPHLRTFKDNFQTCKubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Member of the repulsive guidance molecule (RGM) family that contributes to the patterning of the developing nervous system (By similarity). Acts as a bone morphogenetic protein (BMP) coreceptor that potentiates BMP signaling (By similarity). Promotes neuronal adhesion (By similarity). May inhibit neurite outgrowth. 
Sequence Annotation
 LIPID 413 413 GPI-anchor amidated asparagine
 CARBOHYD 120 120 N-linked (GlcNAc...) (Potential).
 CARBOHYD 383 383 N-linked (GlcNAc...) (Potential).  
Keyword
 3D-structure; Cell membrane; Complete proteome; Glycoprotein; GPI-anchor; Lipoprotein; Membrane; Reference proteome; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 437 AA 
Protein Sequence
MGLRAAPSSA AAAAAEVEQR RSPGLCPPPL ELLLLLLFSL GLLHAGDCQQ PAQCRIQKCT 60
TDFVSLTSHL NSAVDGFDSE FCKALRAYAG CTQRTSKACR GNLVYHSAVL GISDLMSQRN 120
CSKDGPTSST NPEVTHDPCN YHSHAGAREH RRGDQNPPSY LFCGLFGDPH LRTFKDNFQT 180
CKVEGAWPLI DNNYLSVQVT NVPVVPGSSA TATNKITIIF KAHHECTDQK VYQAVTDDLP 240
AAFVDGTTSG GDSDAKSLRI VERESGHYVE MHARYIGTTV FVRQVGRYLT LAIRMPEDLA 300
MSYEESQDLQ LCVNGCPLSE RIDDGQGQVS AILGHSLPRT SLVQAWPGYT LETANTQCHE 360
KMPVKDIYFQ SCVFDLLTTG DANFTAAAHS ALEDVEALHP RKERWHIFPS SGNGTPRGGS 420
DLSVSLGLTC LILIVFL 437 
Gene Ontology
 GO:0046658; C:anchored to plasma membrane; ISS:HGNC.
 GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; ISS:HGNC.
 GO:0045121; C:membrane raft; IEA:UniProtKB-SubCell.
 GO:0042802; F:identical protein binding; ISS:HGNC.
 GO:0007411; P:axon guidance; TAS:Reactome.
 GO:0030509; P:BMP signaling pathway; ISS:HGNC.
 GO:0007155; P:cell adhesion; ISS:HGNC.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:HGNC. 
Interpro
 IPR009496; RGM_C.
 IPR010536; RGM_N. 
Pfam
 PF06534; RGM_C
 PF06535; RGM_N 
SMART
  
PROSITE
  
PRINTS