CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041484
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Proteasome subunit alpha type 
Protein Synonyms/Alias
  
Gene Name
 PSMA6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
30YQVEYAFKAINQGGLubiquitination[1]
45TSVAVRGKDCAVIVTubiquitination[1]
54CAVIVTQKKVPDKLLubiquitination[1]
55AVIVTQKKVPDKLLDubiquitination[1]
59TQKKVPDKLLDSSTVubiquitination[1]
71STVTHLFKITENIGCubiquitination[1]
102RYEAANWKYKYGYEIubiquitination[1, 2]
104EAANWKYKYGYEIPVubiquitination[1]
116IPVDMLCKRIADISQubiquitination[1]
170AGYYCGFKATAAGVKubiquitination[1]
177KATAAGVKQTESTSFubiquitination[1]
187ESTSFLEKKVKKKFDubiquitination[1]
188STSFLEKKVKKKFDWubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Cytoplasm; Hydrolase; Nucleus; Protease; Proteasome; Reference proteome; Threonine protease. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 252 AA 
Protein Sequence
MSRGSSAGFD RHITIFSPEG RLYQVEYAFK AINQGGLTSV AVRGKDCAVI VTQKKVPDKL 60
LDSSTVTHLF KITENIGCVM TGMTADSRSQ VQRARYEAAN WKYKYGYEIP VDMLCKRIAD 120
ISQVYTQNAE MRPLGCWSFL FLGMILIGID EEQGPQVYKC DPAGYYCGFK ATAAGVKQTE 180
STSFLEKKVK KKFDWTFEQT VETAITCLST VLSIDFKPSE IEVGVVTVEN PKFRILTEAE 240
IDAHLVALAE RD 252 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:HPA.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0019773; C:proteasome core complex, alpha-subunit complex; IEA:InterPro.
 GO:0004298; F:threonine-type endopeptidase activity; IEA:UniProtKB-KW.
 GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. 
Interpro
 IPR000426; Proteasome_asu_N.
 IPR023332; Proteasome_suA-type.
 IPR001353; Proteasome_sua/b. 
Pfam
 PF00227; Proteasome
 PF10584; Proteasome_A_N 
SMART
 SM00948; Proteasome_A_N 
PROSITE
 PS00388; PROTEASOME_A_1
 PS51475; PROTEASOME_A_2 
PRINTS