CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015496
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Differentially expressed in FDCP 8 homolog 
Protein Synonyms/Alias
 DEF-8 
Gene Name
 DEF8 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
67DAMEYDEKLARFRQAubiquitination[1]
81AHLNPFNKQSGPRQHubiquitination[1]
154RQAIEECKQVILELPubiquitination[2]
166ELPEQSEKQKDAVVRubiquitination[1]
180RLIHLRLKLQELKDPubiquitination[1, 2]
185RLKLQELKDPNEDEPubiquitination[1]
491DNSTTCPKCARLSLRubiquitination[2]
499CARLSLRKQSLFQEPubiquitination[1, 2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
 ZN_FING 199 250 Phorbol-ester/DAG-type 1.
 ZN_FING 429 489 Phorbol-ester/DAG-type 2.  
Keyword
 Alternative splicing; Complete proteome; Metal-binding; Polymorphism; Reference proteome; Repeat; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 512 AA 
Protein Sequence
MAILSLRAPG PWQAMQVWAD RTLLTPHTGV TSQVLGVAAA VMTPLPGGHA AGRTREARWD 60
AMEYDEKLAR FRQAHLNPFN KQSGPRQHEQ GPGEEVPDVT PEEALPELPP GEPEFRCPER 120
VMDLGLSEDH FSRPVGLFLA SDVQQLRQAI EECKQVILEL PEQSEKQKDA VVRLIHLRLK 180
LQELKDPNED EPNIRVLLEH RFYKEKSKSV KQTCDKCNTI IWGLIQTWYT CTGCYYRCHS 240
KCLNLISKPC VSSKVSHQAE YELNICPETG LDSQDYRCAE CRAPISLRGV PSEARQCDYT 300
GQYYCSHCHW NDLAVIPARV VHNWDFEPRK VSRCSMRYLA LMVSRPVLRL REINPLLFSY 360
VEELVEIRKL RQDILLMKPY FITCREAMEA RLLLQLQDRQ HFVENDEMYS VQDLLDVHAG 420
RLGCSLTEIH TLFAKHIKLD CERCQAKGFV CELCREGDVL FPFDSHTSVC ADCSAVFHRD 480
CYYDNSTTCP KCARLSLRKQ SLFQEPGPDV EA 512 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0035556; P:intracellular signal transduction; IEA:InterPro. 
Interpro
 IPR025258; DUF4206.
 IPR002219; Prot_Kinase_C-like_PE/DAG-bd.
 IPR001841; Znf_RING. 
Pfam
 PF00130; C1_1
 PF13901; DUF4206 
SMART
 SM00109; C1
 SM00184; RING 
PROSITE
 PS00479; ZF_DAG_PE_1
 PS50081; ZF_DAG_PE_2 
PRINTS