CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022909
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Poly [ADP-ribose] polymerase 2 
Protein Synonyms/Alias
 PARP-2; hPARP-2; ADP-ribosyltransferase diphtheria toxin-like 2; ARTD2; NAD(+) ADP-ribosyltransferase 2; ADPRT-2; Poly[ADP-ribose] synthase 2; pADPRT-2 
Gene Name
 PARP2 
Gene Synonyms/Alias
 ADPRT2; ADPRTL2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
37PEDSSPAKKTRRCQRacetylation[1]
38EDSSPAKKTRRCQRQacetylation[1]
276KLTVAQIKAGYQSLKubiquitination[2, 3, 4]
348EIAIKLVKTELQSPEubiquitination[2, 4]
469YFADMSSKSANYCFAubiquitination[3]
480YCFASRLKNTGLLLLubiquitination[3]
Reference
 [1] Identification of lysines 36 and 37 of PARP-2 as targets for acetylation and auto-ADP-ribosylation.
 Haenni SS, Hassa PO, Altmeyer M, Fey M, Imhof R, Hottiger MO.
 Int J Biochem Cell Biol. 2008;40(10):2274-83. [PMID: 18436469]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks. 
Sequence Annotation
 DOMAIN 231 348 PARP alpha-helical.
 DOMAIN 356 583 PARP catalytic.
 DNA_BIND 1 88 Potential.
 MOTIF 4 7 Nuclear localization signal (Potential).
 MOTIF 35 40 Nuclear localization signal (Potential).
 MOD_RES 37 37 N6-acetyllysine (By similarity).
 MOD_RES 38 38 N6-acetyllysine (By similarity).
 MOD_RES 226 226 Phosphoserine.
 MOD_RES 232 232 Phosphoserine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; DNA-binding; Glycosyltransferase; NAD; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 583 AA 
Protein Sequence
MAARRRRSTG GGRARALNES KRVNNGNTAP EDSSPAKKTR RCQRQESKKM PVAGGKANKD 60
RTEDKQDGMP GRSWASKRVS ESVKALLLKG KAPVDPECTA KVGKAHVYCE GNDVYDVMLN 120
QTNLQFNNNK YYLIQLLEDD AQRNFSVWMR WGRVGKMGQH SLVACSGNLN KAKEIFQKKF 180
LDKTKNNWED REKFEKVPGK YDMLQMDYAT NTQDEEETKK EESLKSPLKP ESQLDLRVQE 240
LIKLICNVQA MEEMMMEMKY NTKKAPLGKL TVAQIKAGYQ SLKKIEDCIR AGQHGRALME 300
ACNEFYTRIP HDFGLRTPPL IRTQKELSEK IQLLEALGDI EIAIKLVKTE LQSPEHPLDQ 360
HYRNLHCALR PLDHESYEFK VISQYLQSTH APTHSDYTMT LLDLFEVEKD GEKEAFREDL 420
HNRMLLWHGS RMSNWVGILS HGLRIAPPEA PITGYMFGKG IYFADMSSKS ANYCFASRLK 480
NTGLLLLSEV ALGQCNELLE ANPKAEGLLQ GKHSTKGLGK MAPSSAHFVT LNGSTVPLGP 540
ASDTGILNPD GYTLNYNEYI VYNPNQVRMR YLLKVQFNFL QLW 583 
Gene Ontology
 GO:0005730; C:nucleolus; IDA:MGI.
 GO:0005654; C:nucleoplasm; IDA:MGI.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IEA:EC.
 GO:0006284; P:base-excision repair; IEA:Compara.
 GO:0006281; P:DNA repair; TAS:ProtInc.
 GO:0006471; P:protein ADP-ribosylation; TAS:ProtInc. 
Interpro
 IPR012317; Poly(ADP-ribose)pol_cat_dom.
 IPR004102; Poly(ADP-ribose)pol_reg_dom.
 IPR008893; WGR_domain. 
Pfam
 PF00644; PARP
 PF02877; PARP_reg
 PF05406; WGR 
SMART
 SM00773; WGR 
PROSITE
 PS51060; PARP_ALPHA_HD
 PS51059; PARP_CATALYTIC 
PRINTS