CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030980
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Upstream stimulatory factor 2 
Protein Synonyms/Alias
 cDNA FLJ60670, highly similar to Upstream stimulatory factor 2 
Gene Name
 USF2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
222RTHPYSPKIDGTRTPubiquitination[1, 2]
248VERRRRDKINNWIVQubiquitination[3]
269DCNADNSKTGASKGGubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 349 AA 
Protein Sequence
MLDPGLDPAA SATAAAAASH DKGPEAEEGV ELQEGGDGPG AEEQTAVAIT SVQQAAFGDH 60
NIQYQFRTET NGGQVTYRVV QVTDGQLDGQ GDTAGAVSVV STAAFAGGQQ AVTQVGVDGA 120
AQRPGPAAAS VPPGPAAPFP LAVIQNPFSN GGSPAAEAVS GEARFAYFPA SSVGDTTAVS 180
VQTTDQSLQA GGQFYVMMTP QDVLQTGTQR TIAPRTHPYS PKIDGTRTPR DERRRAQHNE 240
VERRRRDKIN NWIVQLSKII PDCNADNSKT GASKGGILSK ACDYIRELRQ TNQRMQETFK 300
EAERLQMDNE LLRQQVGAGP GAGQGPGAPD ARRWPSAPLT SVVSARSRS 349 
Gene Ontology
  
Interpro
 IPR011598; bHLH_dom. 
Pfam
 PF00010; HLH 
SMART
 SM00353; HLH 
PROSITE
 PS50888; BHLH 
PRINTS