CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020481
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytosol aminopeptidase 
Protein Synonyms/Alias
 Leucine aminopeptidase 3; LAP-3; Leucyl aminopeptidase; Proline aminopeptidase; Prolyl aminopeptidase 
Gene Name
 Lap3 
Gene Synonyms/Alias
 Lapep 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
43LVLGIYAKDKDDDLPacetylation[1]
45LGIYAKDKDDDLPQFacetylation[1, 2, 3, 4]
45LGIYAKDKDDDLPQFsuccinylation[4]
45LGIYAKDKDDDLPQFubiquitination[5]
61SAGESFNKLVSGKLRacetylation[1, 4, 6, 7]
61SAGESFNKLVSGKLRsuccinylation[4]
61SAGESFNKLVSGKLRubiquitination[5]
79NISGPPLKAGKTRTFacetylation[4]
79NISGPPLKAGKTRTFsuccinylation[4]
79NISGPPLKAGKTRTFubiquitination[5]
103VVVVGLGKRSAGVDDacetylation[4, 7]
103VVVVGLGKRSAGVDDsuccinylation[4]
103VVVVGLGKRSAGVDDubiquitination[5]
118QENWHEGKENIRAAVubiquitination[5]
188GDLEAWEKGVLFASGubiquitination[5]
221RFAEIIEKNLKSASSacetylation[1, 3, 4, 6, 7, 8, 9]
221RFAEIIEKNLKSASSsuccinylation[4]
221RFAEIIEKNLKSASSubiquitination[5]
231KSASSKTKVHIRPKSacetylation[1]
342CENMPSGKANKPGDVubiquitination[5]
455ADVNNLGKYRSAGACacetylation[1, 2, 3, 4, 7, 9]
455ADVNNLGKYRSAGACsuccinylation[4]
455ADVNNLGKYRSAGACubiquitination[5]
476REFVTHTKWAHLDIAacetylation[1, 4]
476REFVTHTKWAHLDIAsuccinylation[4]
489IAGVMTNKDEIPYLRacetylation[1, 4, 6, 7]
489IAGVMTNKDEIPYLRsuccinylation[4]
Reference
 [1] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [2] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [3] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [6] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [7] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [8] Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice.
 Fritz KS, Galligan JJ, Hirschey MD, Verdin E, Petersen DR.
 J Proteome Res. 2012 Mar 2;11(3):1633-43. [PMID: 22309199]
 [9] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). 
Sequence Annotation
 ACT_SITE 294 294 By similarity.
 ACT_SITE 368 368 By similarity.
 METAL 282 282 Zinc 2 (By similarity).
 METAL 287 287 Zinc 1 (By similarity).
 METAL 287 287 Zinc 2 (By similarity).
 METAL 305 305 Zinc 2 (By similarity).
 METAL 364 364 Zinc 1 (By similarity).
 METAL 366 366 Zinc 1 (By similarity).
 METAL 366 366 Zinc 2 (By similarity).
 MOD_RES 221 221 N6-acetyllysine (By similarity).
 MOD_RES 238 238 Phosphoserine (By similarity).  
Keyword
 Acetylation; Alternative initiation; Aminopeptidase; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Magnesium; Manganese; Metal-binding; Phosphoprotein; Protease; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 519 AA 
Protein Sequence
MYLLPLPAAA RVALRRLGVR GLWDRGLSTA DMTKGLVLGI YAKDKDDDLP QFTSAGESFN 60
KLVSGKLREM LNISGPPLKA GKTRTFYGLH QDFPSVVVVG LGKRSAGVDD QENWHEGKEN 120
IRAAVAAGCR QVQDLELPSV EVDPCGDAQA AAEGAVLGLY EYDDLKQKKK VAVSAKLHGS 180
GDLEAWEKGV LFASGQNLAR HLMESPANEM TPTRFAEIIE KNLKSASSKT KVHIRPKSWI 240
EEQEMGSFLS VAKGSEEPPV FLEIHYMGSP NATEAPLVFV GKGITFDSGG ISIKASANMD 300
LMRADMGGAA TICSAIVSAA KLNLPINIIG LAPLCENMPS GKANKPGDVV RARNGKTIQV 360
DNTDAEGRLI LADALCYAHT FNPKVIINAA TLTGAMDVAL GSGATGVFTN SSWLWNKLFE 420
ASVETGDRVW RMPLFEHYTR QVIDCQLADV NNLGKYRSAG ACTAAAFLRE FVTHTKWAHL 480
DIAGVMTNKD EIPYLRKGMS GRPTRTLIEF LLRFSKDSS 519 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0005802; C:trans-Golgi network; ISO:MGI.
 GO:0004177; F:aminopeptidase activity; IEA:UniProtKB-KW.
 GO:0030145; F:manganese ion binding; IEA:InterPro.
 GO:0008235; F:metalloexopeptidase activity; IEA:InterPro.
 GO:0008233; F:peptidase activity; IDA:MGI.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW. 
Interpro
 IPR011356; Leucine_aapep/pepB.
 IPR000819; Peptidase_M17_C.
 IPR023042; Peptidase_M17_leu_NH2_pept.
 IPR008283; Peptidase_M17_N. 
Pfam
 PF00883; Peptidase_M17
 PF02789; Peptidase_M17_N 
SMART
  
PROSITE
 PS00631; CYTOSOL_AP 
PRINTS
 PR00481; LAMNOPPTDASE.