CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014237
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Oxysterols receptor LXR-beta 
Protein Synonyms/Alias
 Liver X receptor beta; Nuclear receptor subfamily 1 group H member 2; Retinoid X receptor-interacting protein No.15; Ubiquitously-expressed nuclear receptor 
Gene Name
 Nr1h2 
Gene Synonyms/Alias
 Lxrb; Rip15; Unr; Unr2 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
433ALRLQDKKLPPLLSEacetylation[1]
Reference
 [1] SIRT1 deacetylates and positively regulates the nuclear receptor LXR.
 Li X, Zhang S, Blander G, Tse JG, Krieger M, Guarente L.
 Mol Cell. 2007 Oct 12;28(1):91-106. [PMID: 17936707
Functional Description
 Orphan receptor. Binds preferentially to double-stranded oligonucleotide direct repeats having the consensus half-site sequence 5'-AGGTCA-3' and 4-nt spacing (DR-4). Regulates cholesterol uptake through MYLIP-dependent ubiquitination of LDLR, VLDLR and LRP8; DLDLR and LRP8. 
Sequence Annotation
 DNA_BIND 75 152 Nuclear receptor.
 ZN_FING 78 98 NR C4-type.
 ZN_FING 116 140 NR C4-type.
 REGION 216 446 Ligand-binding (Potential).  
Keyword
 Complete proteome; DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 446 AA 
Protein Sequence
MSSPTSSLDT PVPGNGSPQP STSATSPTIK EEGQETDPPP GSEGSSSAYI VVILEPEDEP 60
ERKRKKGPAP KMLGHELCRV CGDKASGFHY NVLSCEGCKG FFRRSVVHGG AGRYACRGSG 120
TCQMDAFMRR KCQLCRLRKC KEAGMREQCV LSEEQIRKKR IQKQQQQQPP PPSEPAASSS 180
GRPAASPGTS EASSQGSGEG EGIQLTAAQE LMIQQLVAAQ LQCNKRSFSD QPKVTPWPLG 240
ADPQSRDARQ QRFAHFTELA IISVQEIVDF AKQVPGFLQL GREDQIALLK ASTIEIMLLE 300
TARRYNHETE CITFLKDFTY SKDDFHRAGL QVEFINPIFE FSRAMRRLGL DDAEYALLIA 360
INIFSADRPN VQEPSRVEAL QQPYVEALLS YTRIKRPQDQ LRFPRMLMKL VSLRTLSSVH 420
SEQVFALRLQ DKKLPPLLSE IWDVHE 446 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0005634; C:nucleus; IDA:BHF-UCL.
 GO:0003677; F:DNA binding; IDA:MGI.
 GO:0004879; F:ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:MGI.
 GO:0046965; F:retinoid X receptor binding; IDA:MGI.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0001133; F:sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity; IEA:Compara.
 GO:0003707; F:steroid hormone receptor activity; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0044255; P:cellular lipid metabolic process; IDA:MGI.
 GO:0042632; P:cholesterol homeostasis; IDA:BHF-UCL.
 GO:0010887; P:negative regulation of cholesterol storage; IEA:Compara.
 GO:0032369; P:negative regulation of lipid transport; IEA:Compara.
 GO:0048550; P:negative regulation of pinocytosis; IEA:Compara.
 GO:0045861; P:negative regulation of proteolysis; IMP:BHF-UCL.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.
 GO:0032270; P:positive regulation of cellular protein metabolic process; IEA:Compara.
 GO:0010875; P:positive regulation of cholesterol efflux; IDA:BHF-UCL.
 GO:0045723; P:positive regulation of fatty acid biosynthetic process; IEA:Compara.
 GO:0090108; P:positive regulation of high-density lipoprotein particle assembly; IDA:BHF-UCL.
 GO:0010884; P:positive regulation of lipid storage; IMP:BHF-UCL.
 GO:0051006; P:positive regulation of lipoprotein lipase activity; IEA:Compara.
 GO:0090187; P:positive regulation of pancreatic juice secretion; IMP:BHF-UCL.
 GO:0090340; P:positive regulation of secretion of lysosomal enzymes; IMP:BHF-UCL.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.
 GO:0010867; P:positive regulation of triglyceride biosynthetic process; IEA:Compara.
 GO:0048384; P:retinoic acid receptor signaling pathway; IEA:Compara. 
Interpro
 IPR023257; Liver_X_rcpt.
 IPR008946; Nucl_hormone_rcpt_ligand-bd.
 IPR000536; Nucl_hrmn_rcpt_lig-bd_core.
 IPR001723; Str_hrmn_rcpt.
 IPR001628; Znf_hrmn_rcpt.
 IPR013088; Znf_NHR/GATA. 
Pfam
 PF00104; Hormone_recep
 PF00105; zf-C4 
SMART
 SM00430; HOLI
 SM00399; ZnF_C4 
PROSITE
 PS00031; NUCLEAR_REC_DBD_1
 PS51030; NUCLEAR_REC_DBD_2 
PRINTS
 PR02034; LIVERXRECPTR.
 PR00398; STRDHORMONER.
 PR00047; STROIDFINGER.