CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004596
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Neuromodulin 
Protein Synonyms/Alias
 Axonal membrane protein GAP-43; Growth-associated protein 43; Neural phosphoprotein B-50; pp46 
Gene Name
 GAP43 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
19EKNDDDQKIEQDGIKubiquitination[1]
26KIEQDGIKPEDKAHKubiquitination[1]
30DGIKPEDKAHKAATKubiquitination[1]
37KAHKAATKIQASFRGubiquitination[1, 2]
113ETPSEEKKGEGDAATubiquitination[1]
134APASSEEKAGSAETEubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Plays a role in axonal and dendritic filopodia induction. 
Sequence Annotation
 DOMAIN 31 60 IQ.
 REGION 1 4 Important for membrane binding.
 MOD_RES 41 41 Phosphoserine; by PHK and PKC (By
 MOD_RES 94 94 Phosphothreonine (By similarity).
 MOD_RES 181 181 Phosphothreonine (By similarity).
 MOD_RES 202 202 Phosphoserine; by CK2 (By similarity).
 MOD_RES 203 203 Phosphoserine; by CK2 (By similarity).
 LIPID 3 3 S-palmitoyl cysteine (By similarity).
 LIPID 4 4 S-palmitoyl cysteine (By similarity).  
Keyword
 Alternative splicing; Calmodulin-binding; Cell junction; Cell membrane; Cell projection; Complete proteome; Developmental protein; Differentiation; Growth regulation; Lipoprotein; Membrane; Neurogenesis; Palmitate; Phosphoprotein; Polymorphism; Reference proteome; Synapse. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 238 AA 
Protein Sequence
MLCCMRRTKQ VEKNDDDQKI EQDGIKPEDK AHKAATKIQA SFRGHITRKK LKGEKKDDVQ 60
AAEAEANKKD EAPVADGVEK KGEGTTTAEA APATGSKPDE PGKAGETPSE EKKGEGDAAT 120
EQAAPQAPAS SEEKAGSAET ESATKASTDN SPSSKAEDAP AKEEPKQADV PAAVTAAAAT 180
TPAAEDAAAK ATAQPPTETG ESSQAEENIE AVDETKPKES ARQDEGKEEE PEADQEHA 238 
Gene Ontology
 GO:0030424; C:axon; IEA:Compara.
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0031527; C:filopodium membrane; IDA:UniProtKB.
 GO:0032584; C:growth cone membrane; IEA:UniProtKB-SubCell.
 GO:0045202; C:synapse; IEA:UniProtKB-SubCell.
 GO:0016198; P:axon choice point recognition; IEA:Compara.
 GO:0045165; P:cell fate commitment; IEA:Compara.
 GO:0010001; P:glial cell differentiation; IEA:Compara.
 GO:0007205; P:protein kinase C-activating G-protein coupled receptor signaling pathway; TAS:ProtInc.
 GO:0051489; P:regulation of filopodium assembly; IDA:UniProtKB.
 GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
 GO:0009611; P:response to wounding; TAS:ProtInc.
 GO:0042246; P:tissue regeneration; IEA:Compara. 
Interpro
 IPR000048; IQ_motif_EF-hand-BS.
 IPR001422; Neuromodulin.
 IPR017454; Neuromodulin_C.
 IPR018947; Neuromodulin_gap-junction_N.
 IPR018243; Neuromodulin_palmitoyl/P_site. 
Pfam
 PF00612; IQ
 PF06614; Neuromodulin
 PF10580; Neuromodulin_N 
SMART
 SM00015; IQ 
PROSITE
 PS50096; IQ
 PS00412; NEUROMODULIN_1
 PS00413; NEUROMODULIN_2 
PRINTS
 PR00215; NEUROMODULIN.