CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030090
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Rtn4ip1 
Protein Synonyms/Alias
 Reticulon 4 interacting protein 1; Similar to NOGO-interacting mitochondrial protein (Predicted) 
Gene Name
 Rtn4ip1 
Gene Synonyms/Alias
 RGD1563384_predicted; rCG_58574 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
53WVIDKYGKNEVLRFTacetylation[1]
109KRDPLHMKTKGEEFPubiquitination[2]
111DPLHMKTKGEEFPLTubiquitination[2]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 396 AA 
Protein Sequence
MEVLKTCVLR RNACAAVCFW RRKVITRPPY RGISTTSARS TVMPAWVIDK YGKNEVLRFT 60
QNMMLPIIHY PNEVIIKVHA ASVNPIDVNM RSGYGATALN MKRDPLHMKT KGEEFPLTLG 120
RDVSGVVMEC GLDVRYFQPG DEVWAAVPPW KQGTLSEFVV VSGNEVSHKP KSLTHTQAAS 180
LPYVALTAWS AINKVGGLNA KNCMGKRALI LGASGGVGTF AIQVMKAWGA HVTAVCSKDA 240
SELVRKLGAD EVIDYTMGSV EEQLKSLKLF DFILDNVGGS TETWALNFLK KWSGATYVTL 300
VTPFLLNMDR LGIADGMLQT GVTVGTKALK HLWQGVHYRW AFFMASGPYL DEIAELVDGG 360
KIRPVIERTF PFSEVPEAFL KVERGHARGK TVVNVV 396 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:InterPro.
 GO:0016491; F:oxidoreductase activity; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR013154; ADH_GroES-like.
 IPR002085; ADH_SF_Zn-type.
 IPR011032; GroES-like.
 IPR016040; NAD(P)-bd_dom.
 IPR002364; Quin_OxRdtase/zeta-crystal_CS.
 IPR027061; RTN4IP1_mt. 
Pfam
 PF08240; ADH_N 
SMART
  
PROSITE
 PS01162; QOR_ZETA_CRYSTAL 
PRINTS