CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001952
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S6 
Protein Synonyms/Alias
 30S ribosomal protein S6, fully modified isoform; 30S ribosomal protein S6, non-modified isoform 
Gene Name
 rpsF 
Gene Synonyms/Alias
 b4200; JW4158 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
35AITGAEGKIHRLEDWacetylation[1]
35AITGAEGKIHRLEDWpupylation[2]
53QLAYPINKLHKAHYVacetylation[1]
56YPINKLHKAHYVLMNacetylation[1, 3, 4]
93RSMVMRTKHAVTEASacetylation[1, 4, 5]
104TEASPMVKAKDERREacetylation[1]
106ASPMVKAKDERRERRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli.
 Cerda-Maira FA, McAllister F, Bode NJ, Burns KE, Gygi SP, Darwin KH.
 EMBO Rep. 2011 Jul 8;12(8):863-70. [PMID: 21738222]
 [3] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508]
 [4] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [5] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842
Functional Description
 Binds together with S18 to 16S ribosomal RNA. 
Sequence Annotation
 MOD_RES 93 93 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 135 AA 
Protein Sequence
MRHYEIVFMV HPDQSEQVPG MIERYTAAIT GAEGKIHRLE DWGRRQLAYP INKLHKAHYV 60
LMNVEAPQEV IDELETTFRF NDAVIRSMVM RTKHAVTEAS PMVKAKDERR ERRDDFANET 120
ADDAEAGDSE EEEEE 135 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoliWiki.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR000529; Ribosomal_S6.
 IPR020815; Ribosomal_S6_CS.
 IPR020814; Ribosomal_S6_plastid/chlpt.
 IPR014717; Transl_elong_EF1B/ribosomal_S6. 
Pfam
 PF01250; Ribosomal_S6 
SMART
  
PROSITE
 PS01048; RIBOSOMAL_S6 
PRINTS