CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-036328
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Trafficking protein particle complex subunit 11 
Protein Synonyms/Alias
  
Gene Name
 TRAPPC11 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
262LENLTQGKMCLVPGKubiquitination[1]
400VKLTAGLKPGQDANLubiquitination[1]
504AVKFVSTKFEHLERVubiquitination[1, 2]
639VRESLPVKYHLQNKTubiquitination[1]
725IPTSIFVKPQGRLMDubiquitination[1, 2, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 739 AA 
Protein Sequence
MSCVSSYAGF DLSDPEKEKV GILAIQLKER NVVHSEIIIT LLSNAVAQFK KYKCPRMKSH 60
LMVQMGEEYY YAKDYTKALK LLDYVMCDYR SEGWWTLLTS VLTTALKCSY LMAQLKDYIT 120
YSLELLGRAS TLKDDQKSRI EKNLINVLMN ESPDPEPDCD ILAVKTAQKL WADRISLAGS 180
NIFTIGVQDF VPFVQCKAKF HAPSFHVDVP VQFDIYLKAD CPHPIRFSKL CVSFNNQEYN 240
QFCVIEEASK ANEVLENLTQ GKMCLVPGKT RKLLFKFVAK TEDVGKKIEI TSVDLALGNE 300
TGRCVVLNWQ GGGGDAASSQ EALQAARSFK RRPKLPDNEV HWDSIIIQAS TMIISRVPNI 360
SVHLLHEPPA LTNEMYCLVV TVQSHEKTQI RDVKLTAGLK PGQDANLTQK THVTLHGTEL 420
CDESYPALLT DIPVGDLHPG EQLEKMLYVR CGTVGSRMFL VYVSYLINTT VEEKEIVCKC 480
HKDETVTIET VFPFDVAVKF VSTKFEHLER VYADIPFLLM TDLLSASPWA LTIVSSELQL 540
APSMTTVDQL ESQVDNVILQ TGESASECFC LQCPSLGNIE GGVATGHYII SWKRTSAMEN 600
IPIITTVITL PHVIVENIPL HVNADLPSFG RVRESLPVKY HLQNKTDLVQ DVEISVEPSD 660
AFMFSGLKQI RLRILPGTEQ EMLYNFYPLM AGYQQLPSLN INLLRFPNFT NQLLRRFIPT 720
SIFVKPQGRL MDDTSIAAA 739 
Gene Ontology
  
Interpro
 IPR012880; DUF1683_C.
 IPR021773; Foie-gras_1. 
Pfam
 PF11817; Foie-gras_1
 PF07919; Gryzun 
SMART
  
PROSITE
  
PRINTS