CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040841
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 PHD finger protein 20-like protein 1 
Protein Synonyms/Alias
  
Gene Name
 PHF20L1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
150QDWIALVKAAAAAAAubiquitination[1, 2]
593SRSMFTEKTTTYQYPubiquitination[2]
800IIAGVEKKIAQDTVNubiquitination[2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 992 AA 
Protein Sequence
MSKKPPNRPG ITFEIGARLE ALDYLQKWYP SRIEKIDYEE GKMLVHFERW SHRYDEWIYW 60
DSNRLRPLER PALRKEGLKD EEDFFDFKAG EEVLARWTDC RYYPAKIEAI NKEGTFTVQF 120
YDGVIRCLKR MHIKAMPEDA KGQDWIALVK AAAAAAAKNK TGSKPRTSAN SNKDKDKDER 180
KWFKVPSKKE ETSTCIATPD VEKKEDLPTS SETFVGLHVE NVPKMVFPQP ESTLSNKRKN 240
NQGNSFQAKR ARLNKITGLL ASKAVGVDGA EKKEDYNETA PMLEQAISPK PQSQKKNEAD 300
ISSSANTQKP ALLSSTLSSG KARSKKCKHE SGDSSGCIKP PKSPLSPELI QVEDLTLVSQ 360
LSSSVINKTS PPQPVNPPRP FKHSERRRRS QRLATLPMPD DSVEKVSSPS PATDGKVFSI 420
SSQNQQESSV PEVPDVAHLP LEKLGPCLPL DLSRGSEVTA PVASDSSYRN ECPRAEKEDT 480
QMLPNPSSKA IADGRGAPAA AGISKTEKKV KLEDKSSTAF GKRKEKDKER REKRDKDHYR 540
PKQKKKKKKK KKSKQHDYSD YEDSSLEFLE RCSSPLTRSS GSSLASRSMF TEKTTTYQYP 600
RAILSVDLSG ENLSDVDFLD DSSTESLLLS GDEYNQDFDS TNFEESQDED DALNEIVRCI 660
CEMDEENGFM IQCEECLCWQ HSVCMGLLEE SIPEQYICYI CRDPPGQRWS AKYRYDKEWL 720
NNGRMCGLSF FKENYSHLNA KKIVSTHHLL ADVYGVTEVL HGLQLKIGIL KNKHHPDLHL 780
WACSGKRKDQ DQIIAGVEKK IAQDTVNREE KKYVQNHKEP PRLPLKMEGT YITSEHSYQK 840
PQSFGQDCKS LADPGSSDDD DVSSLEEEQE FHMRSKNSLQ YSAKEHGMPE KNPAEGNTVF 900
VYNDKKGTED PGDSHLQWQL NLLTHIENVQ NEVTSRMDLI EKEVDVLESW LDFTGELEPP 960
DPLARLPQLK RHIKQLLIDM GKVQQIATLC SV 992 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR022255; DUF3776.
 IPR002999; Tudor.
 IPR014002; Tudor-like_plant.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF12618; DUF3776
 PF00628; PHD 
SMART
 SM00743; Agenet
 SM00249; PHD
 SM00333; TUDOR 
PROSITE
 PS01359; ZF_PHD_1 
PRINTS