CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-033448
UniProt Accession
C9JK03_HUMAN
;
C9JK03
Genbank Protein ID
AC024243
;
AC069200
;
AC110372
Genbank Nucleotide ID
Protein Name
Circadian locomoter output cycles protein kaput
Protein Synonyms/Alias
Gene Name
CLOCK
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
85
IDFLRKH
K
EITAQSD
ubiquitination
[1]
Reference
[1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
Mol Cell. 2011 Oct 21;44(2):325-40. [
PMID: 21906983
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; DNA-binding; Nucleus; Reference proteome; Transcription; Transcription regulation.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
182 AA
Protein Sequence
MLFTVSCSKM SSIVDRDDSS IFDGLVEEDD KDKAKRVSRN KSEKKRRDQF NVLIKELGSM 60
LPGNARKMDK STVLQKSIDF LRKHKEITAQ SDASEIRQDW KPTFLSNEEF TQLMLEALDG 120
FFLAIMTDGS IIYVSESVTS LLEHLPSDLV DQSIFNFIPE GEHSEVYKIL STHLLESDSL 180
TP 182
Gene Ontology
GO:0005737
; C:cytoplasm; IEA:Compara.
GO:0005667
; C:transcription factor complex; IEA:Compara.
GO:0003677
; F:DNA binding; IEA:UniProtKB-KW.
GO:0000982
; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; IEA:Compara.
GO:0001190
; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IEA:Compara.
GO:0004871
; F:signal transducer activity; IEA:InterPro.
GO:0032922
; P:circadian regulation of gene expression; IEA:Compara.
Interpro
IPR011598
; bHLH_dom.
IPR001067
; Nuc_translocat.
IPR000014
; PAS.
IPR013767
; PAS_fold.
Pfam
PF00010
; HLH
PF00989
; PAS
SMART
SM00353
; HLH
SM00091
; PAS
PROSITE
PS50888
; BHLH
PS50112
; PAS
PRINTS
PR00785
; NCTRNSLOCATR.