CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018456
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sorting nexin-9 
Protein Synonyms/Alias
  
Gene Name
 Snx9 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
179KSSSPYFKDSEPAEAubiquitination[1]
207SMKLPLNKFPGFAKPubiquitination[1]
223MEQYLLAKQLAKPKEubiquitination[1]
267GSKMYGLKSYIEYQLubiquitination[1]
288RSVNHRYKHFDWLYEacetylation[2, 3]
407DAVGKFTKAMDDGVKacetylation[2]
425TVGQEHWKRCTGPLPubiquitination[1]
511PDIIGAHKGAIEKVKubiquitination[1]
528DKLVATSKITPQDKQubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 May be involved in several stages of intracellular trafficking. Plays a role in endocytosis via clathrin-coated pits, but also clathrin-independent, actin-dependent fluid-phase endocytosis. Plays a role in macropinocytosis. Promotes internalization of TNFR. Promotes degradation of EGFR after EGF signaling. Stimulates the GTPase activity of DNM1. Promotes DNM1 oligomerization. Promotes activation of the Arp2/3 complex by WASL, and thereby plays a role in the reorganization of the F- actin cytoskeleton. Binds to membranes enriched in phosphatidylinositol 4,5-bisphosphate and promotes membrane tubulation. Has lower affinity for membranes enriched in phosphatidylinositol 3-phosphate (By similarity). 
Sequence Annotation
 DOMAIN 1 62 SH3.
 DOMAIN 250 360 PX.
 DOMAIN 392 595 BAR.
 REGION 201 213 Critical for tubulation activity (By
 BINDING 286 286 Phosphatidylinositol 4,5-bisphosphate (By
 BINDING 288 288 Phosphatidylinositol 4,5-bisphosphate (By
 BINDING 313 313 Phosphatidylinositol 4,5-bisphosphate (By
 BINDING 327 327 Phosphatidylinositol 4,5-bisphosphate (By
 MOD_RES 175 175 Phosphoserine.
 MOD_RES 288 288 N6-acetyllysine (By similarity).
 MOD_RES 536 536 Phosphothreonine.  
Keyword
 3D-structure; Acetylation; Cell membrane; Cell projection; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Endocytosis; Golgi apparatus; Lipid-binding; Membrane; Phosphoprotein; Protein transport; Reference proteome; SH3 domain; Transport; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 595 AA 
Protein Sequence
MATKARVMYD FAAEPGNNEL TVTEGEIITV TNPNVGGGWL EGKNNKGEQG LVPTDYVEIL 60
PNDGKDPFSC GNSVADQAFL DSLTASTAQT NSSSANSNNQ VGGGNDPWTA WNAPKPGNWD 120
SSDAWGSRTD GTSAQRNSSA NNWDTGFGHP QAYQGPATGD DDEWDEDWDD PKSSSPYFKD 180
SEPAEAGGIQ RGNSRAGASS MKLPLNKFPG FAKPGMEQYL LAKQLAKPKE KIAIIVGDYG 240
PMWVYPTSTF DCVVADPRKG SKMYGLKSYI EYQLTPTNTN RSVNHRYKHF DWLYERLLVK 300
FGSAIPIPSL PDKQVTGRFE EEFIKMRMER LQAWMTRMCR HPVVSESEVF QQFLNFRDEK 360
EWKTGKRKAE KDELVGVMIF STMEPEAPDL DLIEIEQKCD AVGKFTKAMD DGVKELLTVG 420
QEHWKRCTGP LPKEYQKIGK ALQSLAAVFS SSGYQGETDL NDAITEAGKT YEEIASLVAE 480
QPKKDLHFLM ECNHEYKGFL GCFPDIIGAH KGAIEKVKES DKLVATSKIT PQDKQTMVKR 540
VGTMSYALQA EMNHFHSNRI YDYNSVIRLY LEQQVQFYET IAEKLRQALS RFPVM 595 
Gene Ontology
 GO:0030136; C:clathrin-coated vesicle; IEA:UniProtKB-SubCell.
 GO:0030659; C:cytoplasmic vesicle membrane; ISS:UniProtKB.
 GO:0031234; C:extrinsic to internal side of plasma membrane; ISS:UniProtKB.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0001726; C:ruffle; IEA:UniProtKB-SubCell.
 GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
 GO:0005545; F:1-phosphatidylinositol binding; ISS:UniProtKB.
 GO:0007154; P:cell communication; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IMP:MGI.
 GO:0060988; P:lipid tube assembly; ISS:UniProtKB.
 GO:0043547; P:positive regulation of GTPase activity; ISS:UniProtKB.
 GO:0032461; P:positive regulation of protein oligomerization; ISS:UniProtKB.
 GO:0006898; P:receptor-mediated endocytosis; ISS:UniProtKB. 
Interpro
 IPR001683; Phox.
 IPR001452; SH3_domain.
 IPR014536; Snx9.
 IPR019497; Sorting_nexin_WASP-bd-dom. 
Pfam
 PF10456; BAR_3_WASP_bdg
 PF00787; PX
 PF00018; SH3_1 
SMART
 SM00312; PX
 SM00326; SH3 
PROSITE
 PS51021; BAR
 PS50195; PX
 PS50002; SH3 
PRINTS