Tag | Content |
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CPLM ID | CPLM-019862 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 |
Protein Synonyms/Alias | 60 kDa BRG-1/Brm-associated factor subunit B; BRG1-associated factor 60B; BAF60B |
Gene Name | Smarcd2 |
Gene Synonyms/Alias | Baf60b |
Created Date | July 27, 2013 |
Organism | Mus musculus (Mouse) |
NCBI Taxa ID | 10090 |
Lysine Modification | Position | Peptide | Type | References |
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262 | SLVIELDKELYGPDN | ubiquitination | [1] | 289 | ETDGFQVKRPGDLNV | ubiquitination | [1] | 514 | VGRHIFAKVQQRRQE | ubiquitination | [1] |
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Reference | [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues. Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C. Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [ PMID: 22790023] |
Functional Description | Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology) (By similarity). |
Sequence Annotation | DOMAIN 307 382 SWIB. MOD_RES 217 217 Phosphothreonine (By similarity). |
Keyword | Alternative splicing; Chromatin regulator; Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation; Ubl conjugation. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 531 AA |
Protein Sequence | MSGRGAGGFP LPPLSPGGGA VAAALGAPPP PAGPGMLPSP ALRGPGPSGG MGVPGAAAFR 60 PMGPAGPAAQ YQRPGMSPGS RMPMAGLQVG PPAGSPFGTA APLRPGMPPT MMDPFRKRLL 120 VPQAQPPMPA QRRGLKRRKM ADKVLPQRIR ELVPESQAYM DLLAFERKLD QTIARKRMEI 180 QEAIKKPLTQ KRKLRIYISN TFSPSKADGD NAGTAGTPGG TPAADKVASW ELRVEGKLLD 240 DPSKQKRKFS SFFKSLVIEL DKELYGPDNH LVEWHRMPTT QETDGFQVKR PGDLNVKCTL 300 LLMLDHQPPQ YKLDPRLARL LGVHTQTRAA IMQALWLYIK HNQLQDGHER EYINCNRYFR 360 QIFSCGRLRF SEIPMKLAGL LQHPDPIVIN HVISVDPNDQ KKTACYDIDV EVDDPLKAQM 420 SNFLASTTNQ QEIASLDVKI HETIESINQL KTQRDFMLSF STEPQDFIQE WLRSQRRDLK 480 IITDVIGNPE EERRAAFYHQ PWAQEAVGRH IFAKVQQRRQ ELEQVLGIRL T 531 |
Gene Ontology | GO:0016514; C:SWI/SNF complex; IEA:Compara. GO:0006338; P:chromatin remodeling; IEA:Compara. GO:0006337; P:nucleosome disassembly; IEA:Compara. GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW. GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |
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