CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003744
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S11-B 
Protein Synonyms/Alias
 RP41; S18; YS12 
Gene Name
 RPS11B 
Gene Synonyms/Alias
 RPS18B; YBR048W; YBR0501 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
15QSERAFQKQPHIFNNubiquitination[1]
36KRTKRWYKNAGLGFKubiquitination[1]
46GLGFKTPKTAIEGSYubiquitination[1]
56IEGSYIDKKCPFTGLubiquitination[1]
57EGSYIDKKCPFTGLVubiquitination[1]
79TGTVVSTKMHRTIVIubiquitination[1]
96AYLHYIPKYNRYEKRubiquitination[1]
105NRYEKRHKNVPVHVSubiquitination[1]
133GQCRPISKTVRFNVVubiquitination[1]
141TVRFNVVKVSAAAGKubiquitination[1]
148KVSAAAGKANKQFAKubiquitination[1]
151AAAGKANKQFAKF**ubiquitination[1]
155KANKQFAKF******ubiquitination[1]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
  
Sequence Annotation
 MOD_RES 2 2 N-acetylserine.  
Keyword
 Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 156 AA 
Protein Sequence
MSTELTVQSE RAFQKQPHIF NNPKVKTSKR TKRWYKNAGL GFKTPKTAIE GSYIDKKCPF 60
TGLVSIRGKI LTGTVVSTKM HRTIVIRRAY LHYIPKYNRY EKRHKNVPVH VSPAFRVQVG 120
DIVTVGQCRP ISKTVRFNVV KVSAAAGKAN KQFAKF 156 
Gene Ontology
 GO:0030686; C:90S preribosome; IDA:SGD.
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
 GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IC:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IGI:SGD.
 GO:0000028; P:ribosomal small subunit assembly; IMP:SGD. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR000266; Ribosomal_S17.
 IPR019978; Ribosomal_S17_archaeal.
 IPR019979; Ribosomal_S17_CS. 
Pfam
 PF00366; Ribosomal_S17 
SMART
  
PROSITE
 PS00056; RIBOSOMAL_S17 
PRINTS
 PR00973; RIBOSOMALS17.